Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2572 ATGGATGCACAAGCGGGTTTATCACTCGGGTTAAACGCTACCATGCCATCTCCAACAAATTCATCAAATGGGTCACTCTCTGATAACTCTTTCTCTTTCCATTTGAGTTCAAAACCAAACCCTTCTCTTTCATGGCGTTTACTTCATGAAAAACCAGACAACAATGTTCATGTCATAAAACAAGAACATGGAGATGAAGTTGTTGATGATGAAGAAGAAGAAGAAGGTGAGACAATTGATTTTATGGGTAGGCCTGTTTGTTTCAAGAGGAGATTAGAGGAAGAAACACAACAAAGTTTTGTTCCGGCGAAGCGTGTTGCGGTGGATTCTAAGGCTGTGAGCTGGGGGAATCAGCCACTAAGCGTTGCTGATCCTGAAATATTTACTATTATGGAGAAGGAGAAGATGAGACAGTTCAAAGGGATTGAATTGATAGCTTCTGAGAATTTTGTGTGCAGGGCTGTAATGGAAGCACTTGGTAGTCATTTGACTAATAAGTATTCAGAGGGAATGCCGGGAGCGAAATATTATACCGGTAATCAGTATATTGATCAGCTTGAATTTCTTTGTTGTGAGCGTGCATTGAATGCTTTTGATCTTGATTCAAGTAATTGGGGTGTTAATGTTCAGCCTTATTCATGTACTTCAGCTAATTTTGCTGTTTATACTGGTCTTTTGAATCCGGGGGATAGGATTATGGGTTTGGATTCGGCGTCTGGTGGACATTTGAGTCATGGTTATTATACTCATGGTGGGAAGAAGGTTTCTGCTGCTTCTATATTTTTTGAGACTTTGCCTTATAAGGTGAATCCTTTGACTGGTTATATTGATTATGATAAGGTTGAGGAGAAAGCGGTGGATTATAGACCGAAGATACTTATTTGTGGTGGTAGTTCTTATCCTAGAGAATGGGATTATGGGAGGTTTATGAAGATTGCTGATAAATGTGGAGCTGTTTTGATGTGTGATATGGCTCATATTAGTGGTCTTGTTGCGGCTAAGGAAGTTGTGAGTCCATTTGATTACTGTGATATTGTTACCTCAACAACCCACAAAAGTCTTCGAGGTCCAAGAGGAGGTATCGTCTTTTATCGAAAAGGGCCAAAACCAAGAAAGCAAGGCTTTGTTCTTAATCACGGAGATGATAGTAGTAATTATGATTTTGAGGAGAAGATAAACTTTGCTTTATATCCATCGTTACAAGGAGGTCCCCACAACAATCACACTGCTGCTCTTGCCATAGCTTTGAAACAAGTTGCGACTCCAGAGTATAAAGCATACATGCAGCAGGTGAAGAGAAATGCACAGGCATTAGCAACTGCGTTGTTGAAAAGAAAATGCAGATTGGTTACTGATGGGACTGACAATCATCTTTTGCTCTGGGATATAACTGCACTCGGTTTAATTGACAGAAACTATGAGAAGGTCTGTGAGGCGTGTCACATCACTCTCAATAAGTGTGCCATTTATGGTTCTATTTCTTCTGGAGGAGTGAGAATCGGAACTCCTGCAATGACATCAAGAGGCTGTGTCGAGGACGATTTCGAGACCATAGCCGATTTTCTTCTGAGGGCAGCTCAGATTACCAGCATTATACAGAGGGAACATGGTAAATCATGCAAAGATTTTCTCAAGGGTCTTCAGAGTAATAAAGATATTTTTGACCTCAGAAATCGGGTTGAGACATTTGGCTCCCAGTTTGAAATGCCAGGATTCAATTATTGA 1725 0.4046 MDAQAGLSLGLNATMPSPTNSSNGSLSDNSFSFHLSSKPNPSLSWRLLHEKPDNNVHVIKQEHGDEVVDDEEEEEGETIDFMGRPVCFKRRLEEETQQSFVPAKRVAVDSKAVSWGNQPLSVADPEIFTIMEKEKMRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAKYYTGNQYIDQLEFLCCERALNAFDLDSSNWGVNVQPYSCTSANFAVYTGLLNPGDRIMGLDSASGGHLSHGYYTHGGKKVSAASIFFETLPYKVNPLTGYIDYDKVEEKAVDYRPKILICGGSSYPREWDYGRFMKIADKCGAVLMCDMAHISGLVAAKEVVSPFDYCDIVTSTTHKSLRGPRGGIVFYRKGPKPRKQGFVLNHGDDSSNYDFEEKINFALYPSLQGGPHNNHTAALAIALKQVATPEYKAYMQQVKRNAQALATALLKRKCRLVTDGTDNHLLLWDITALGLIDRNYEKVCEACHITLNKCAIYGSISSGGVRIGTPAMTSRGCVEDDFETIADFLLRAAQITSIIQREHGKSCKDFLKGLQSNKDIFDLRNRVETFGSQFEMPGFNY* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2572 574 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 96 573 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mal2g2572 574 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 344 360 IPR019798 GO:0030170
Mal2g2572 574 Gene3D - 149 429 IPR015421 GO:0003824
Mal2g2572 574 Gene3D Aspartate Aminotransferase, domain 1 124 570 IPR015422 GO:0003824
Mal2g2572 574 SUPERFAMILY PLP-dependent transferases 115 572 IPR015424 -
Mal2g2572 574 Hamap Serine hydroxymethyltransferase [glyA]. 119 571 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mal2g2572 574 Pfam Serine hydroxymethyltransferase 121 521 IPR039429 -
Mal2g2572 574 CDD SHMT 124 529 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mal2g2572 574 MobiDBLite consensus disorder prediction 10 29 - -
Mal2g2572 574 MobiDBLite consensus disorder prediction 1 29 - -
Mal2g2572 574 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 7 96 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2572 Mal-Chr2 32811181 32816382 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2572 K00600 - gmx:100776419 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2572 2 32811181 32816382 Mal2g2572 2 32811181 32816382 ECH