Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2563 ATGGGTTCATTTTTCAGTGTGGCGAAAAATACCAATTCTGATCAAAGTGAGCGGGATGGAGTCTCTTTGAATGATACATGTAAGAGGCAAAGAATGTCGTCTACCGTCGATGAAGAGAATCCAAGACTTTTTCCAAATCTCCCTGATGAGGTATCAATTCAGATTATTGCTAGACTTCCTAGAATTTCTTACTACAATGTAAGGCTTGTGTCAAGGAAGTGGAAGTCGACTATTATGAGTTCGGAACTATATAAAGTAAGAAAAGAACTAGGAACAACAGAAGAGTGGCTATATTTGTTGGTTAAGTTAGGAGAAAATAAGCTTCTGTGGCATGCTGTAGATCCGAGATCGAGGATATGGCAGAGACTGCCTACTATGCCTAATGTTGTTGAAGAAGAATCTAAGAAGGGTTCTTCTTCTAGGCTTTGGATGTGGAACATGGTGGATGGGATGAGAATTGCTGAAGTTATTAGAGGCTTTCTTGGACAGAAGAATGCATTTGATGAAATGCCCTTTTGTGGTTGTGCTATTGGAGCTGTTGGTGGATGTCTCTACGTTTTAGGTGGATTCTCTAAAGCTTCAACTATGAAATGCGTCTGGCGATTCGATCCAATACAAAATATTTGGAGCAAGGTGACTTCTATGTCTACGGGTCGGGCATACTGTAAGACAGGAATCTTAAACAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTGCGGCTGGATTGATACCCCTTCAATCTGCTGAAGTTTTTGATCCCTTGACAGGTACATGGTCAGACGTGCCTAGTATGCCATTCTCGAGAGCTCAGGTCCTTCCAAACGCATTCTTGGCTGACATGTTAAAGCCAATTGCGACAGGGTTGACATCATACATGGGAAGGTTATGTGTTCCACAGAGTTTATACTCATGGCCCTTTTTTGTTGATGTTGGAGGAGAAATCTACGATCCCGAATCAAACTCATGGATTGAAATGCCAATTGGAATGGGAGAAGGTTGGCCCGCAAGGCAAGCAGGTACAAAATTGAGTGTTGTAGTCGATGGCGAATTATATGCCTTTGATCCTTCTAACACTATGGACAGTGGAAGGATCAAGGTATATGATCAAGGAGAAGATGCTTGGAAAGTTGTCATTGGAAAAGTTCCCATATATGGTTCCGATGATTCAGAATCTCCTTATCTACTTGCTGGTTTCCATGGAAAGCTTCATGTCATTACAAAAGACGCCAATCGTAATATTGCTGTTCTGCAGGCCGAGCTGCGCAGTAATTTGGATTCTTCACCATCATCACAAAGTTCCTTACATGAATTCGTGGACCCGCCGGCGGAAACAGATGCCGTTGTTTGGAAGATAGTTGCTAGTAGGTGTTTGGGACAGGCTGAACTAGTTAGTTGCCAAGTAATTGATATGTAG 1419 0.4228 MGSFFSVAKNTNSDQSERDGVSLNDTCKRQRMSSTVDEENPRLFPNLPDEVSIQIIARLPRISYYNVRLVSRKWKSTIMSSELYKVRKELGTTEEWLYLLVKLGENKLLWHAVDPRSRIWQRLPTMPNVVEEESKKGSSSRLWMWNMVDGMRIAEVIRGFLGQKNAFDEMPFCGCAIGAVGGCLYVLGGFSKASTMKCVWRFDPIQNIWSKVTSMSTGRAYCKTGILNNKLYVVGGVSQGAAGLIPLQSAEVFDPLTGTWSDVPSMPFSRAQVLPNAFLADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPESNSWIEMPIGMGEGWPARQAGTKLSVVVDGELYAFDPSNTMDSGRIKVYDQGEDAWKVVIGKVPIYGSDDSESPYLLAGFHGKLHVITKDANRNIAVLQAELRSNLDSSPSSQSSLHEFVDPPAETDAVVWKIVASRCLGQAELVSCQVIDM* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2563 472 Pfam Kelch motif 171 216 IPR006652 GO:0005515
Mal2g2563 472 Pfam Kelch motif 219 267 IPR006652 GO:0005515
Mal2g2563 472 MobiDBLite consensus disorder prediction 1 25 - -
Mal2g2563 472 MobiDBLite consensus disorder prediction 1 20 - -
Mal2g2563 472 SUPERFAMILY Kelch motif 104 407 IPR015915 GO:0005515
Mal2g2563 472 Gene3D - 29 125 - -
Mal2g2563 472 SMART kelc_smart 230 276 IPR006652 GO:0005515
Mal2g2563 472 SMART kelc_smart 183 229 IPR006652 GO:0005515
Mal2g2563 472 SUPERFAMILY F-box domain 31 87 IPR036047 GO:0005515
Mal2g2563 472 SMART fbox_2 47 87 IPR001810 GO:0005515
Mal2g2563 472 ProSiteProfiles F-box domain profile. 41 87 IPR001810 GO:0005515
Mal2g2563 472 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 5 471 - -
Mal2g2563 472 Pfam F-box-like 44 85 IPR001810 GO:0005515
Mal2g2563 472 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 5 471 - -
Mal2g2563 472 Gene3D - 130 382 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2563 Mal-Chr2 32679149 32680567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2563 37 265 Miscellaneous Gene Families AT4G33900 27.897 1.85e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2563 - - gmx:100806691 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2563 2 32679149 32680567 Mal2g2563 2 32679149 32680567 ECH