Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2548 ATGGAGCAATTCACCAACGACGATCTCGAATACGTTAACTTCGAAGATTACGTCGATTACGAATTCTCCGATTTCGAAGACGAAGACCAAACCTTCTCCAACAATGCATCTCACCGTACCACCTCCGATTCCGACTCTGACTTCGAAGACGATTTCGAAACGAGTAATCCGAAAACTGATACTTCGGCTTTGGAAGCACGAAACGGGAAAGATATTCAGGGAATTCCATGGGAGAAGCTTAATTATAGTAGAGATGAATATCGTGAAACTCGTTTGAAACAGTATAAGAATTACGAGAGTCTCACGCGCTCTCGTGAAGACCTTGATAAGGAATGCTTGGAAGTGGAGAAAGGGAATTCGTTTTATGATTTTCAGTTTAATACCAGGCTTGTCAAATCAACAATTGCGCATTTTCAGCTGAGGAATCTGTTGTGGGCAACATCAAAGCATGATGTATACCTTATGCAAAACTACTCCCTAATGCATTGGTCCTCATTACTACGAAGGGGTAAAGAAGTGCTTAATGTGGCCAAACCGATTATTCCAACTCTTAAGCATTCTGGATTAGCCCACCCTCTCTCGCGAGTTCAAATCAGCACCATGGCTGTTAAGGAAAACTTGATGGTGGCAGGTGGTTTCCATGGGGAGCTTCTTTGCAAGAATTTGAATCATTCTGGAGTTGCATTCTGTAGTAAAATAACAACAGATGATAGTGCTATAACCAATGCAGTGGATGTTTTCCGCAATCCCAGTGGGTCATTGAGGGTCATTGCAGCAAATAATGATTCCCAAGTTCGGGTTTTTGATGCAGAGAATTTTGCTTCGCTTGGTTGTTTCAAGTATGATTGGTCTGTCAATAATGCTTCTGTTAGTCCGGATGGAAAGTCGTTAGTTGTTCTTGGGGACAGTACTGAGGGATTGATAGCTGATGCTAATACTGGGAAGGTCACTGGAAACCTAAAAGGGCACTTGGACTATTCTTTTGCATCTGCTTGGCACCCGAATGGACAAATATTGGCTACCGGGAATCAGGACACAACATGCAGGTTGTGGGACATAAGAAATCTTTCGCAGTCCATGGCAGTATTAAAGGGAAGAATGGGTGCAATAAGGGCCTTAAGATTCACATCAGATGGACGGTTTTTGGCCACGGCTGAGCCTGCAGACTTTGTCCATATATATGATTCACATTCTGGTTACGAACAAAGTCAAGAGATAGATATCTTTGGTGAAATTGCTGGTGTATCGTTTAGCCCTGACACAGAGGCTCTGTTTGTTGGTGTTGCTGACCGAACCTACGGTAGCTTGTTAGAGTTCACCAGAAAACATAGTTATCAGTATCTGGACTCGATGATTTAA 1359 0.4283 MEQFTNDDLEYVNFEDYVDYEFSDFEDEDQTFSNNASHRTTSDSDSDFEDDFETSNPKTDTSALEARNGKDIQGIPWEKLNYSRDEYRETRLKQYKNYESLTRSREDLDKECLEVEKGNSFYDFQFNTRLVKSTIAHFQLRNLLWATSKHDVYLMQNYSLMHWSSLLRRGKEVLNVAKPIIPTLKHSGLAHPLSRVQISTMAVKENLMVAGGFHGELLCKNLNHSGVAFCSKITTDDSAITNAVDVFRNPSGSLRVIAANNDSQVRVFDAENFASLGCFKYDWSVNNASVSPDGKSLVVLGDSTEGLIADANTGKVTGNLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLATAEPADFVHIYDSHSGYEQSQEIDIFGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRKHSYQYLDSMI* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2548 452 Pfam WD domain, G-beta repeat 315 352 IPR001680 GO:0005515
Mal2g2548 452 PANTHER OS03G0386000 PROTEIN 1 451 - -
Mal2g2548 452 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 1 451 - -
Mal2g2548 452 SMART WD40_4 313 352 IPR001680 GO:0005515
Mal2g2548 452 SMART WD40_4 356 395 IPR001680 GO:0005515
Mal2g2548 452 SMART WD40_4 215 269 IPR001680 GO:0005515
Mal2g2548 452 SUPERFAMILY WD40 repeat-like 192 432 IPR036322 GO:0005515
Mal2g2548 452 ProSiteProfiles Trp-Asp (WD) repeats profile. 320 361 IPR001680 GO:0005515
Mal2g2548 452 ProSitePatterns Trp-Asp (WD) repeats signature. 339 353 IPR019775 -
Mal2g2548 452 Gene3D - 212 448 IPR015943 GO:0005515
Mal2g2548 452 MobiDBLite consensus disorder prediction 28 67 - -
Mal2g2548 452 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 320 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2548 Mal-Chr2 32411875 32416741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2548 302 432 Miscellaneous Gene Families AT5G08390 30.282 1.47e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2548 - - gmx:100775453 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2548 2 32411875 32416741 Mal2g2548 2 32411875 32416741 ECH