Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2542 ATGGAGGAGCGGGCCTCACCGCCGCCACCACCTCCTCCTCCACATGATTCTAATTCTAAACCCCACTTACCTAACATTAGCTCCGGTACCTACGTTGTCCAAGTCCCTAAGGACCAAATCTACCGCGTTCCACCACCGGAAAATGCACATATTGTCGAGCAACATCGAAGCCCTCCCAAAAAGGAGACAAATCGGACATGTTGTTGGTGTTTTGTGTTCATTTTCATCCTAGCCGTTGTAATAGTGATTGGAGTTGTTCTTGGTAGCCTATTTTCCATTGTTTTTACGCCAAAGGACCCAAGATTTTCAATCCAACAGTTTCTTTTACAAACCAAACCCCACTCACAATATAAAATCACTTTACATGCCCAAAATCCAAATTCAAATGTGGACATTTTGTATAAAGAAGGAGGTGATATTTCCCTCTCTTCAAAAAGACAAAAAATTGCTTCAGGTGCTTATCCAAGTTTCTCTCAAGCACATCAAAATTCAACCAAGTTTGAGGTAACTTTAAAAGGTTCAACAACCACATTGCCTAAGGAGGTGGAGGAAAGCGTGACAAATAATAAAAGCAAAGTGCATGTTACATTTTCCTTATTAATTCATGTCCAAGCCCAAATGAAAATGGGTTTGTTGCATAGTGGGTCAATGAAATACGACGTTTCATGTCAAGTAACGGTGGATACATTGGCCAAAACGACTCGTGTAGTTTCTCAACAATGTCAAACTAAACGACATTAG 741 0.4076 MEERASPPPPPPPPHDSNSKPHLPNISSGTYVVQVPKDQIYRVPPPENAHIVEQHRSPPKKETNRTCCWCFVFIFILAVVIVIGVVLGSLFSIVFTPKDPRFSIQQFLLQTKPHSQYKITLHAQNPNSNVDILYKEGGDISLSSKRQKIASGAYPSFSQAHQNSTKFEVTLKGSTTTLPKEVEESVTNNKSKVHVTFSLLIHVQAQMKMGLLHSGSMKYDVSCQVTVDTLAKTTRVVSQQCQTKRH* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2542 246 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 11 244 - -
Mal2g2542 246 MobiDBLite consensus disorder prediction 1 19 - -
Mal2g2542 246 MobiDBLite consensus disorder prediction 1 27 - -
Mal2g2542 246 Pfam Late embryogenesis abundant protein 120 223 IPR004864 -
Mal2g2542 246 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2542 Mal-Chr2 32330461 32331201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2542 29 243 EF-hand Containing Proteins AT5G21130 31.111 1.10e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2542 - - aprc:113853148 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2542 2 32330461 32331201 Mal2g2542 2 32330461 32331201 ECH