Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2447 ATGGGTGGATCACATTCAAAACGGAGGAACTCTAGGCAACACTCTTCTTCCTCAAGGTCAAGTCATTTGTTTCCTCAATATCAATCACCTTATTTGCCACAACAAACTCAAGATCATGGATATAATTATGGGGTTCCACCTCCACCTCAAAGCTATGGTGGTGTTGGTCATGCTTCTCAACAAAGTAAGAGGTCAGACAAGAAGTATACAATGATAGGTGATAATTATAGGAGCTTGGAACAGGTAACTGAGGCTCTAGCGAGTGCTGGCCTAGAGTCTTCTAATCTCATTGTTGGCATTGATTTTACAAAGAGCAACGAGTGGACAGGCGCAAGGTCATTTCAAAGGAGATGCCTGCATCACATCGGGCATGAACCAAATCCATATGAACAAGCTATATCTATCATTGGGAAAACATTGTCATCCTTTGATGAGGATAACTTGATTCCCTGTTTTGGATTCGGAGATGCATCAACACATGACCAGGAAGTTTTTAGTTTCAATGCCGAGGATAGATTTTGTCATGGATTTGAAGAAGTGCTGTCACGGTATAGGGAACTGGTGCCTCAATTAAGGCTTGCAGGACCCACATCATTTGCCCCAATCATTGAGATGGCAATCACCATTGTTGAGCAAAGTGAAGGCCAATACCATGTTTTATTGATTATAGCAGATGGGCAGGTGACAAGAAGTGTTGACATTGATCATGGACAATTGAGTGCACAAGAAAAGAAAACTGTAGATGCTATTGTGAAAGCTAGTGAATATCCCCTGTCAATCATATTAGTCGGAGTTGGAGACGGGCCATGGGATATGATGAAAAAATTTGACGATAACATTCCTGCACGAGCATTTGATAATTTTCAGTTTGTGAATTTCACGGAAATAATGTCGAAGAACATGGATAGGTCTAGAAAGGAAGCCGAGTTTGCACTTTCTGCCTTGATGGAAATACCTTCCCAGTACAAAGCAACACTAGAACTTAGTATATTGGGCAATCGTAGTAGAAGGAACGATATACACAGGATTCCTCTACCGCCACCTCAATATGGCGCACCATCTTTCAACCCCCCAAAAACTTCCAATCAAAACAGTTTTCGCCCCAGTGCACCCTCTCAGAAACACGTTACCACGAACCCCCATGCAAGTTCTGCTTCTGATAATCAGTTTTGTCCAATTTGCCTCACTAATCCGAAGGATATGGCCTTTGGTTGCGGACATCAGACATGCTGTGAGTGCGGACAAGATCTTCAGTTATGCCCTATTTGCAGGAGTAGCATTAATACTAGGATAAAACTTTATTAG 1305 0.4215 MGGSHSKRRNSRQHSSSSRSSHLFPQYQSPYLPQQTQDHGYNYGVPPPPQSYGGVGHASQQSKRSDKKYTMIGDNYRSLEQVTEALASAGLESSNLIVGIDFTKSNEWTGARSFQRRCLHHIGHEPNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFNAEDRFCHGFEEVLSRYRELVPQLRLAGPTSFAPIIEMAITIVEQSEGQYHVLLIIADGQVTRSVDIDHGQLSAQEKKTVDAIVKASEYPLSIILVGVGDGPWDMMKKFDDNIPARAFDNFQFVNFTEIMSKNMDRSRKEAEFALSALMEIPSQYKATLELSILGNRSRRNDIHRIPLPPPQYGAPSFNPPKTSNQNSFRPSAPSQKHVTTNPHASSASDNQFCPICLTNPKDMAFGCGHQTCCECGQDLQLCPICRSSINTRIKLY* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2447 434 SUPERFAMILY RING/U-box 383 430 - -
Mal2g2447 434 ProSiteProfiles Zinc finger RING-type profile. 391 424 IPR001841 -
Mal2g2447 434 MobiDBLite consensus disorder prediction 1 15 - -
Mal2g2447 434 PANTHER RING-FINGER PROTEIN 1 434 - -
Mal2g2447 434 Pfam Copine 118 331 IPR010734 -
Mal2g2447 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 369 434 IPR013083 -
Mal2g2447 434 PANTHER COPINE FAMILY PROTEIN 1 1 434 - -
Mal2g2447 434 MobiDBLite consensus disorder prediction 339 385 - -
Mal2g2447 434 CDD RING-HC_RGLG_plant 391 434 IPR045317 GO:0061630|GO:0070534
Mal2g2447 434 SUPERFAMILY vWA-like 94 277 IPR036465 -
Mal2g2447 434 SMART VWA_4 93 296 IPR002035 -
Mal2g2447 434 MobiDBLite consensus disorder prediction 355 385 - -
Mal2g2447 434 Pfam Zinc finger, C3HC4 type (RING finger) 388 428 - -
Mal2g2447 434 MobiDBLite consensus disorder prediction 16 41 - -
Mal2g2447 434 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2447 Mal-Chr2 30821120 30824456 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2447 K16280 - gmx:100809850 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2447 2 30821120 30824456 Mal2g2447 2 30821120 30824456 ECH