Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2424 ATGAATCATAAGCATTCACCAAACTCAGCTACTGCAATTGAGGACTCAACACACTTGGAAGGTGATCACATTTCATCTCCACCATCTTTTCGTAAAATTCGCACAATGGGTGAAGGCAAAAAATTGTTGAAGGTTATCGCTAATCGTCTAGATAGGATTTTTAATAAGAAAGAACGGAACTCAAAATCTGTGGATTGTTCGGAAACATCAAATTCATTATCTGATTATGAAGATAGTGTACAGGAAAGTTCATCTCCATGTAGCTTTGAAGAAGGCATTGCACTAATGGAATCGAGGGATAACCAACCAGAAAGTCCTGAAAATTTGCATGGTGGTATTCTAGTAGATAAGATTTATGCAGTATCTCCATACAATCTTAATGTAGTTCTTTTCGCGCCGGATTCACAGTTTAGGAAAGATTTAGCAGAACTACAAGGGACAACAAATTTGCAAGAAGGGGCTTGGTTCTGGAAAGATGAAGACATGTCTTGTTTGACTCGAGTCGTTACCTATACAAAAGCTGCCTCAAAATTAGTTAAGGCTGTCAATGCCACCGAGGAACAAACCTACATTAGAGTGACTAAAGATGAATTTGATGTGCTTGTTAGTGTATGCACCCCTGAGGTTCCTTATGGGAATTCATTTCGGGTTGAATTGCTTTACAAGATAATGCCAGGAGAAGAGGTGTCTTGTGGAGATGAATCCTCCCATCTTGTGATATCATGGGGAATCGTGTTCCTACAAAGCACAATGATGAAAGGTGTGATTGAGAGTGGTGCTAGACAAGGTTTGAAGGATAGTTTTGATCAGTTTTCCAACCTACTTGCTCAGAGTTTCAAGGTGCTAGATAAGGAAGATTTAATTAACAAAGAACACTTGTTGGCAACTTTGCAGACAGAAAGCCAGTGGAATTGGTGGCAGGCAATTACATACTTCTGGAATTTCACAGTAGTTTCCACATTTTTTATGTTTTTGTATCTGTTGCTGCATATTTTAAGGTGCGGTCCAAGTCAACCTCAGGGATTGGAATTTAGAGGGATTGAACTCCCAGATAGCTTAGGAGAACTAGTCACAAGTGGAATTTTAGTTATCCAGTTGCAGCGTGTTTATACTATGGTATCTCACTTTGTGCAAGCTAGATTTCAAATGGGAACTGACCATGGCCTGAAAGCACATGGTGATGGATGGGTTGTTACTGTAGCTTTAATTGAGGGGGTTGACCTGGCTTCGTTGGAGTCAACAGCGCTATCCGATCCCTATGTAGTTTTAACCTGTAATGGACAAACACGGTCGAGTTCTGTCAAGCTTGAGACATCAGATCCTCAATGGAATGAGATATTAGAGTTTGATGCTATGGAAGAACCACCATCAGTTTTATATGTGGAAGTTTTTGATTTTGATGGTCCATTTGACCAGGACATTTCACTTGGACATGCTGAGATCAATTTCCTAAAGCATACATCAACAGAATTGGCAGACATGTGGACCATGCTTGAAGGAAAACTCGCCCAGTCTGCTCAATCGAAGTTGCATTTGAGAATTTTCTTGGACAATAATAAAGGAGTTGAAACTATCAAGGATTACTTGGAGAAGAAGGAAAAGGAAGTAGGCAAAAAGTTGAATCTTCCATCACCTCAAAGGAATTCTACATTCCAGAAATTGTTTGGGTTGCTTCCAGAAGAATTTCTAATCAATGATTTCACATGTTCCCTGAAGAGAAAAATGCATTTACAGGGTCGGCTATTTCTTTCTGCAAGGATTCTGGGATTTTATGCAAATTTGTTTGGACATAAAACAAAATTTTTCTTCCTTTGGGAAGATATTGAAAACATTCAAGTGCTTCCTCCATCATTAGCATCATTAGGAAGCCCTACATTGGCCATAATTCTTCGAAGAGGACGAGGTATTGATGCAAGCCATGGTGCCAAGACGCAAGATGAAGAAGGAAGGCTTAGGTTTCATTTTCAGTCATTTGTTTCATTTGGTTCTGCCTCCAGAACAATAATGGCATTGTGGAGAACAAGAATACTGAACCCCTATCATAAAGAACAAATTACAGAAGAGCATGAAGATCAGGAGGTCTTGGTAATGCCTGAAGACTCTGGATCCATGCTAGAGGATGAAGCAAAAATGTCCAAGATTTACTCTGCTGAACTACCTATTAAGATAAGATCAGTGATGGAAATTTTTGATGGAGGAAACTTAGAGCATAAGATTATGAAAAGAACTGGTTGTATGGACTATGACGCTACACCTTGGGAACTAGTAAAACCCGATGTCCTCGAACGGCGTGTTTCATACCAATTTAATCGACATGTGTCGGTTTTTGATGTCACAAGCACACAACAAAAATTTCCAAATACAAACACTGGAGGATGGATTGTGAATGAAGTTATGGTCCTAAATGGTGTCCCATTTTCTGATCACTATCGTATTCATTTTAGGTACGAAATTGAGAAATCAGCTCTTGGTGAATGTGCTTGCAAGTGTGATGTATACATTGGCATTATGTGGCTTAGGAGCTCTAAGTTTCAGCAAAGGATCAACAGGAACATAAAAGCCAAGTTTAAAATTCGACTCGAGGAAATATTTGAACTGGTGCAAAAAGAGATATGGTTAATGTCTGAGAACTCGCATGTGTAA 2643 0.3927 MNHKHSPNSATAIEDSTHLEGDHISSPPSFRKIRTMGEGKKLLKVIANRLDRIFNKKERNSKSVDCSETSNSLSDYEDSVQESSSPCSFEEGIALMESRDNQPESPENLHGGILVDKIYAVSPYNLNVVLFAPDSQFRKDLAELQGTTNLQEGAWFWKDEDMSCLTRVVTYTKAASKLVKAVNATEEQTYIRVTKDEFDVLVSVCTPEVPYGNSFRVELLYKIMPGEEVSCGDESSHLVISWGIVFLQSTMMKGVIESGARQGLKDSFDQFSNLLAQSFKVLDKEDLINKEHLLATLQTESQWNWWQAITYFWNFTVVSTFFMFLYLLLHILRCGPSQPQGLEFRGIELPDSLGELVTSGILVIQLQRVYTMVSHFVQARFQMGTDHGLKAHGDGWVVTVALIEGVDLASLESTALSDPYVVLTCNGQTRSSSVKLETSDPQWNEILEFDAMEEPPSVLYVEVFDFDGPFDQDISLGHAEINFLKHTSTELADMWTMLEGKLAQSAQSKLHLRIFLDNNKGVETIKDYLEKKEKEVGKKLNLPSPQRNSTFQKLFGLLPEEFLINDFTCSLKRKMHLQGRLFLSARILGFYANLFGHKTKFFFLWEDIENIQVLPPSLASLGSPTLAIILRRGRGIDASHGAKTQDEEGRLRFHFQSFVSFGSASRTIMALWRTRILNPYHKEQITEEHEDQEVLVMPEDSGSMLEDEAKMSKIYSAELPIKIRSVMEIFDGGNLEHKIMKRTGCMDYDATPWELVKPDVLERRVSYQFNRHVSVFDVTSTQQKFPNTNTGGWIVNEVMVLNGVPFSDHYRIHFRYEIEKSALGECACKCDVYIGIMWLRSSKFQQRINRNIKAKFKIRLEEIFELVQKEIWLMSENSHV* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2424 880 SMART C2_3c 397 496 IPR000008 -
Mal2g2424 880 Pfam C2 domain 397 496 IPR000008 -
Mal2g2424 880 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 2 877 - -
Mal2g2424 880 MobiDBLite consensus disorder prediction 1 15 - -
Mal2g2424 880 ProSiteProfiles C2 domain profile. 377 496 IPR000008 -
Mal2g2424 880 MobiDBLite consensus disorder prediction 65 84 - -
Mal2g2424 880 Pfam GRAM domain 550 617 IPR004182 -
Mal2g2424 880 MobiDBLite consensus disorder prediction 60 84 - -
Mal2g2424 880 Pfam VAD1 Analog of StAR-related lipid transfer domain 714 852 IPR031968 -
Mal2g2424 880 Pfam VAD1 Analog of StAR-related lipid transfer domain 114 263 IPR031968 -
Mal2g2424 880 Gene3D C2 domain 380 516 IPR035892 -
Mal2g2424 880 SMART gram2001c 549 615 IPR004182 -
Mal2g2424 880 MobiDBLite consensus disorder prediction 1 33 - -
Mal2g2424 880 Gene3D - 547 674 IPR011993 -
Mal2g2424 880 PANTHER BNAA05G37250D PROTEIN 2 877 IPR044511 -
Mal2g2424 880 ProSiteProfiles VASt domain profile. 110 283 IPR031968 -
Mal2g2424 880 CDD C2 398 495 - -
Mal2g2424 880 ProSiteProfiles VASt domain profile. 710 871 IPR031968 -
Mal2g2424 880 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 396 521 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2424 Mal-Chr2 30415470 30421090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2424 398 520 Lipid Metabolism Gene Families AT5G17980 27.820 9.42e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2424 - - gmx:100811103 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2424 2 30415470 30421090 Mal2g2424 2 30415470 30421090 ECH