LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g2419	ATGGCCTCAGCTTCGCAAAAGACGACGTCACCACCGTCTTCTTCTTGTTGTCCCCCTCGCGACTCTTCCCGCTTAGCCGCTGTCTCCGCCGCCCCTGCCGTTGCTCAATCCGATCGCGTTCCTAACACCGTTGCCTTGATTCGTCCGCTTGATTCGCTTCCAGAACCTTCCACCACCAATGCTCCCTCTGCTAAGGGAATCACTTCAATGACAAGGCCTCAGTCAAGCCATCCTTTGGATCCTTTATCCGCCGCTGAAATTTCTGTTGCAGTGGCAACTGTGAGGGCTGCTGGAGCCACTCCAGAGCTTAGAGATAGTATGCGCTTCATTGAAGTAGTTTTGCTGGAACCAGATAAACATGTTGTAGCACTGGCAGATGCTTATTTTTTTCCACCTTTCCAACCATCATTACTTCCTAGAAGTAAAGGAGGGCCTGTAATTCCCACTAAACTCCCTCCAAGATGCGCTAGACTTGTTGTTTACAATAAGAAATCAAATGAGACTGCTCTGTGGATTGTCGAATTATCACAAGTGCATGCAGTAACTCGAGGAGGCCATCATCGAGGAAAAGTAATTTCATCAAATGTTGTTCCTGATGTTCAGCCTCCAATGGATGCTGAGGAATATGCAGAATGCGAGGCTGTTGTTAAAAGTTTTCCCCCTTTTATAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGATCTTGTAATGGTTGATCCCTGGTGTGTTGGTTATCATAGTGAATCTGATGCTCCTGGTCGAAGACTTGCTAAACCACTCATATTTTGTCGATCTGAGAGCGACTGCCCTATGGAAAATGGTTATGCCCGCCCAGTTGAGGGCATCTATGTTCTTGTTGATATGCAAAACATGGTGGTGATAGAGTTTGAAGACCGTAAACTTGTTCCTCTGCCTCCGGTTGATCCCTTGAGAAACTATACTCCTGGTGAATCCAGAGGTGGTTCCGATAGAAGTGATGTAAAACCCTTGCAAATTATTCAACCTGAAGGTCCAAGCTTTCGTGTCAATGGGTATTATGTTGAATGGCAGAAGTGGAATTTTCGTATTGGATTCACACCCAAAGAAGGTTTGATTATATATTCTGTTGCATATGTTGATGGTAGTCGAGGGAGAAGGCCTGTTGCACATAGGCTGAGTTTTGTGGAAATGGTTGTACCATATGGAGATCCAAATGAGCCACATTATAGGAAAAATGCTTTTGATGCTGGGGAAGATGGCTTGGGAAAAAATGCACATTCCCTCAAAAAGGGATGTGATTGTTTGGGCTACATCAAATATTTTGATGCTCACTTCACAAATTTCACTGGTGGAGTGGAAACTATCGAAAATTGTGTATGTTTGCATGAAGAGGATCATGGGATTCTCTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGGTCTAGGAGACTTTCAGTTTCTTTTGTATGCACAGTGGCTAATTATGAGTATGCATTTTTTTGGCACTTTTATCAGGATGGAAAGATTGAAGCTGAAGTCAAGCTGACTGGAATTCTCAGCCTAGGAGCCTTGATGCCCGGAGAATTTCGAAAATATGGAACCATGATTGCACCAGGTTTATATGCTCCAGTTCATCAACACTTTTTCGTTGCTCGCATGGACATGTCTGTTGATTCTAGACCCGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATATGAAAGTTGAAGAACCTGGTGAGAATAATATTCACAATAATGCATTCTATGCCCAAGAGACTTTGCTGAGATCTGAATTGGAAGCAATGCGTGATTGCAATCCTTTGACTGCTCGACATTGGATTGTAAGGAACACAAGAACCGGCAATAGAACCGGGCAATTGACAGGCTACAAGCTGGTACCAGGTTCAAACTGCTTGCCGTTGGCAGGTTCCGAGGCAAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAATGTTTGGGTAACAGCATATTCACGTGATGAAATGTTTCCTGGAGGAGAATTTCCTAATCAAAATCCACGAGTTGGTGAAGGACTGGCTACATGGATTAAGCAAAACCGGTCTTTGGAAGAAACAAATATAGTTCTTTGGTATGTATTTGGGATCACGCATGTTCCTCGTCTAGAAGACTGGCCTGTTATGCCAGTAGAACACATTGGTTTTATGCTCATGCCTCACGGGTTCTTCAATTGTTCCCCTGCAGTAGATGTCCCACCTAACTCATGTGAAGTGGAATCTAAAGACAGTGAGATCAAGGATAATGGTGCTTCGAAGCCAATTCAGAGCGGGTTAGCGTCGAAGCTTTAG	2322	0.4414	MASASQKTTSPPSSSCCPPRDSSRLAAVSAAPAVAQSDRVPNTVALIRPLDSLPEPSTTNAPSAKGITSMTRPQSSHPLDPLSAAEISVAVATVRAAGATPELRDSMRFIEVVLLEPDKHVVALADAYFFPPFQPSLLPRSKGGPVIPTKLPPRCARLVVYNKKSNETALWIVELSQVHAVTRGGHHRGKVISSNVVPDVQPPMDAEEYAECEAVVKSFPPFIEAMKKRGIEDMDLVMVDPWCVGYHSESDAPGRRLAKPLIFCRSESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTPGESRGGSDRSDVKPLQIIQPEGPSFRVNGYYVEWQKWNFRIGFTPKEGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFVCTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALMPGEFRKYGTMIAPGLYAPVHQHFFVARMDMSVDSRPGEALNQVVEVNMKVEEPGENNIHNNAFYAQETLLRSELEAMRDCNPLTARHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNVWVTAYSRDEMFPGGEFPNQNPRVGEGLATWIKQNRSLEETNIVLWYVFGITHVPRLEDWPVMPVEHIGFMLMPHGFFNCSPAVDVPPNSCEVESKDSEIKDNGASKPIQSGLASKL*	774

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g2419	773	Gene3D	Copper amine oxidase, catalytic domain	318	744	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Mal2g2419	773	Gene3D	-	206	309	-	-
	Mal2g2419	773	PANTHER	COPPER AMINE OXIDASE	40	769	IPR000269	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Mal2g2419	773	MobiDBLite	consensus disorder prediction	1	20	-	-
	Mal2g2419	773	MobiDBLite	consensus disorder prediction	747	773	-	-
	Mal2g2419	773	Pfam	Copper amine oxidase, enzyme domain	331	739	IPR015798	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Mal2g2419	773	MobiDBLite	consensus disorder prediction	1	33	-	-
	Mal2g2419	773	SUPERFAMILY	Amine oxidase catalytic domain	325	744	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Mal2g2419	773	MobiDBLite	consensus disorder prediction	47	80	-	-
	Mal2g2419	773	PANTHER	AMINE OXIDASE	40	769	-	-
	Mal2g2419	773	SUPERFAMILY	Amine oxidase N-terminal region	201	318	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Mal2g2419	773	MobiDBLite	consensus disorder prediction	53	78	-	-
	Mal2g2419	773	Pfam	Copper amine oxidase, N2 domain	77	175	IPR015800	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Mal2g2419	773	Pfam	Copper amine oxidase, N3 domain	202	305	IPR015802	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Mal2g2419	773	Gene3D	-	61	204	-	-
	Mal2g2419	773	SUPERFAMILY	Amine oxidase N-terminal region	75	203	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g2419	Mal-Chr2	30347183	30353317	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g2419	K00276		-	gmx:100798722	1392.1

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal2g2419	2	30347183	30353317	Mal2g2419	2	30347183	30353317	ECH
	Mal5g4070	5	110949574	110951361	Mal2g2419	2	30347183	30353317	PCT