Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2416 ATGGGTAGCGGCGAAATGGGAGTAGCAGAAAGCGGTGGCGCGTCGTTACCATCAATCGGCACCGACGCAATGAAGCGTCGCGTAACCTACTTCTACGAACCAAGCATCGGCGATTATTACTACGGTCAAGGTCACCCTATGAAACCCCATCGTATCCGCATGGCACACAATCTCATCATTCACTACTCTCTCCACCGTCGTATGCAAATCAACCGTCCTTTCTCCGCCGCGCCGGAAGACATCCGCCGTTTTCACTCCGACGACTACGTCGAGTTTCTCGCCTCCGTTTCGCCGGAGATTGTTTCGGAGAGTTCGCATTCGCATTATCGGCAGCTGAAGAGGTTCAATGTTGGTGAGGATTGTCCGGTTTTCGATGGGCTTTTTCCGTTCTGTCAAGCTTCTGCCGGTGGATCTATTGGTGCTGCTGTTAGGATTAATCGTGGTGATGCTGATATTGCGATTAATTGGGCTGGTGGTTTGCATCATGCTAAGAAAGCTGAAGCTTCTGGGTTTTGTTATGTTAATGATATTGTTCTTGGGATTCTCGAGCTTCTCAAAGTTCATAGGCGTGTGCTGTATGTTGATATTGATGTCCACCATGGAGATGGCGTTGAGGAGGCATTTTACACTACTGATAGAGTGATGACGGTGTCTTTTCATAAGTTTGGTGATTTCTTCCCAGGAACTGGGCATATTAAAGACACTGGGGTGGGCCCTGGAAAGGACTATGCTATAAATGTTCCATTGAATGATGGAATGGATGATGAAAATTTCCGTGCTCTGTTTCGTCCCATTATGCAAAAAGTCATGGATGTTTATCAACCCGATGCAGTCGTTCTTCAATGTGGAGCTGATTCATTGTCAGGTGACAGGTTGGGTTGCTTCAACTTGTCTGTGAAGGGTCATGCAGATTGCCTTCGTTTCCTTAGATCTTTCAATGTTCCTCTAATGGTCTTGGGTGGGGGAGGATACACAGTACGGAATGTTGCTCGTTGTTGGTGTTACGAGACAGCAGTGGCAGTAGGAGTGGAACCTAGTAATAAGTTGCCATACAATGAGTATTATGAATATTTTGGCCCAGACTATACACTTCATGTTGAACCAAACAACATGGAGAACCTAAACACCCCCAAGGATATGGAAAAAATCAGGAACACTTTACTTGAACAAATTTCAAGACTTCCTCATGCACCTAGTGCTCCTTTTCAGACAACACCATCAACCACACAAGTTCCAGAAGAGGAAGAAGAGGACATGGATATAAGACCAAAACGTCAGCTGTGGAGCGGTGAAGATTATGATTCTGAAGATGAAGATGAGAAGGCCGGTATAAGGAACACAAATTTAACTTCCCATATGAGGCGCGCAGCAGATGACATGGATGAAGATAAGCCAGAAGTTAAGCCTGGTGTGCATTCATCGTGCTAA 1428 0.4587 MGSGEMGVAESGGASLPSIGTDAMKRRVTYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIIHYSLHRRMQINRPFSAAPEDIRRFHSDDYVEFLASVSPEIVSESSHSHYRQLKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVRINRGDADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDTGVGPGKDYAINVPLNDGMDDENFRALFRPIMQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPSNKLPYNEYYEYFGPDYTLHVEPNNMENLNTPKDMEKIRNTLLEQISRLPHAPSAPFQTTPSTTQVPEEEEEDMDIRPKRQLWSGEDYDSEDEDEKAGIRNTNLTSHMRRAADDMDEDKPEVKPGVHSSC* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2416 475 Gene3D Histone deacetylase domain 18 406 IPR037138 -
Mal2g2416 475 PRINTS Histone deacetylase signature 136 156 IPR003084 GO:0004407|GO:0016575
Mal2g2416 475 PRINTS Histone deacetylase signature 115 132 IPR003084 GO:0004407|GO:0016575
Mal2g2416 475 PRINTS Histone deacetylase signature 253 271 IPR003084 GO:0004407|GO:0016575
Mal2g2416 475 PRINTS Histone deacetylase signature 177 193 IPR003084 GO:0004407|GO:0016575
Mal2g2416 475 PRINTS Histone deacetylase signature 236 249 IPR003084 GO:0004407|GO:0016575
Mal2g2416 475 PRINTS Histone deacetylase signature 80 98 IPR003084 GO:0004407|GO:0016575
Mal2g2416 475 PRINTS Histone deacetylase signature 47 64 IPR003084 GO:0004407|GO:0016575
Mal2g2416 475 CDD HDAC_classI 31 340 - -
Mal2g2416 475 MobiDBLite consensus disorder prediction 452 469 - -
Mal2g2416 475 PIRSF HDAC_I_euk 13 471 IPR003084 GO:0004407|GO:0016575
Mal2g2416 475 Pfam Histone deacetylase domain 45 338 IPR023801 -
Mal2g2416 475 PRINTS Histone deacetylase superfamily signature 158 181 IPR000286 -
Mal2g2416 475 PRINTS Histone deacetylase superfamily signature 275 285 IPR000286 -
Mal2g2416 475 PRINTS Histone deacetylase superfamily signature 190 205 IPR000286 -
Mal2g2416 475 SUPERFAMILY Arginase/deacetylase 26 393 IPR023696 -
Mal2g2416 475 MobiDBLite consensus disorder prediction 417 431 - -
Mal2g2416 475 MobiDBLite consensus disorder prediction 394 475 - -
Mal2g2416 475 PANTHER HISTONE DEACETYLASE 12 443 - -
Mal2g2416 475 PANTHER HISTONE DEACETYLASE 6 12 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2416 Mal-Chr2 30309528 30314917 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2416 K06067 - gmx:100801159 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2416 2 30309528 30314917 Mal2g2416 2 30309528 30314917 ECH