Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2360 ATGGGTTCTAATGTCCATTCTTCAGGTGTAATTGGTAATGATGAAATTGGTTTCTCTACTCCAAAAATCACTGCTGCTGAAGAACCAAGAAGTGATGAACATCCACAAATTCCTGGATGGTTTGCAGAACATTGTCCAATATGGCCAGGGGAAGCACACTTCTTGAAGGTAGAAAACATTTGTTTCCAAGGGAAATCTGAATTTCAAGATATGCTAGTTTTTCAGACATCAACATATGGTAAGGTATTTGTTCTGGATGGAGCACTCCAACTCACTGAGAAAGATGAATGTTCTTACCAAGAAATGATGACTCACCTTCCTCTTTGCTCAATTCCAAACCCAAAAAAGGTGCTGCTTTTTGGTGGAGGAGATGGTGGCATTCTTAGGGAAATTTCCCGCCACTCATCTGTTGAACAAATTGACATATGTGAAATTGACACTATGCTGATTGATGTTTATACAAAATATTTCCCAGATATAGCTGTTGGATACAAGGACCCCAGAGTCAAGCTTCATGTTATAGATGGAACACTTTTTCTGAATTCTGTCCCAAAAGGCACATATGATGCAATAATAGTGGATGCTTTCGACCCAATAAGGCCTGATCATGAGCTATTTGAAACTCAATTCTTTGAATTGATTTCAAAAGCTCTTCGTCCTGGAGGAGTTTTGTGCATCCAAGCAGAGAGCTTTTGGTTTAAGTCATTGGATATTGAAGAACTCTTAATCAAAAGCAGCCAAATTTTCAAAGGCTCTAGTGACTATGCATGGACTAATGTCCCAACATATCCAAGTGGGGTGATTGGTTTCTTGCTTTGTTCAACTGAAGGTTCACATGTGGACTTCAGAAAGCCAATTAATCCTATTGGTCCTGAAAATTATGGCATATCAAAACACCCCTTGAAGTATTACAACTCAGAGCTTCATTCAGCTTCATTTTGCTTGCCATCTTTTGCTAAAAGGACAAAAGCTAAAGAGAGTACTGCAAAAGAGATTTGA 999 0.3874 MGSNVHSSGVIGNDEIGFSTPKITAAEEPRSDEHPQIPGWFAEHCPIWPGEAHFLKVENICFQGKSEFQDMLVFQTSTYGKVFVLDGALQLTEKDECSYQEMMTHLPLCSIPNPKKVLLFGGGDGGILREISRHSSVEQIDICEIDTMLIDVYTKYFPDIAVGYKDPRVKLHVIDGTLFLNSVPKGTYDAIIVDAFDPIRPDHELFETQFFELISKALRPGGVLCIQAESFWFKSLDIEELLIKSSQIFKGSSDYAWTNVPTYPSGVIGFLLCSTEGSHVDFRKPINPIGPENYGISKHPLKYYNSELHSASFCLPSFAKRTKAKESTAKEI* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2360 332 Gene3D Vaccinia Virus protein VP39 93 327 IPR029063 -
Mal2g2360 332 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 38 321 IPR029063 -
Mal2g2360 332 TIGRFAM speE: spermidine synthase 40 318 IPR001045 GO:0003824
Mal2g2360 332 Hamap Polyamine aminopropyltransferase [speE]. 39 324 IPR001045 GO:0003824
Mal2g2360 332 Pfam Spermidine synthase tetramerisation domain 39 93 IPR035246 -
Mal2g2360 332 PANTHER SPERMIDINE/SPERMINE SYNTHASE 36 325 IPR001045 GO:0003824
Mal2g2360 332 Gene3D Spermidine synthase, tetramerisation domain 23 92 IPR037163 -
Mal2g2360 332 Pfam Spermine/spermidine synthase domain 96 282 - -
Mal2g2360 332 PANTHER SPERMIDINE SYNTHASE 36 325 - -
Mal2g2360 332 CDD AdoMet_MTases 116 227 - -
Mal2g2360 332 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 38 275 IPR030374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2360 Mal-Chr2 29453611 29456428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2360 K00797 - gmx:100785862 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2360 2 29453611 29456428 Mal2g2360 2 29453611 29456428 ECH