Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2332 ATGTTGAACCAGTTACTGGTTAAACCAACTCAACGAACCTTCACCACTTCACGATTCTGGTTTCCCTTCACCACCGTAGTTGAATCTCCACCACCTTCCATCGACGCCACCGTCGCAAAACTCGTCCTCGAATCAGATCCAAAAACCCTCTCCCAAACCCTATCAAACCCCACTTTCCAATGGACCCCACATCTCGTCAACAACGTTCTCAAACGTCTCTGGAATCACGGACCCAAAGCCTTGCAATTCTTCAAACACCTAGACCGCCACCCAACCTACATCCACTCCACCACCTCCTTCGAACACGCCGTCGACATCGCCGCCCGGTTGCGTGAATACAACACCGCTTGGGCTTTAATGGGCCGTATGCGGGCCCTCCGTCTCGGCCCAACTCCAAAAACCTTCGCTATCCTCGCTGAACGTTATGCAACTGGTGGAAAAGCCCATAAGGCGGTGAAAGTGTTTTTGTCAATGCATGAACATGGTTGTCATCAGGATTTGAATTCGTTTAATACTATCCTTGATGTTCTTTGCAAGACGAAGCGCGTTGAAATGGCGAATAATTTGTTTAAAACTTTGAAGGGTAGATTTAAATGTGATAGTGTTAGTTATAATATAATGGCGAATGGTTGGTGTTTGATTAAGCGAACGCCGATGGCGTTGCAGGTTTTGAAGGAGATGGTGGAGAGGGGGATTACACCAACGATGGTTACTTATAATACATTGTTGAAAGGCTATTTTAGGTGTGGGCAATTGAATGAGGCTTGGGAGTTTTTTTTGGAGATGAAGAAGAGGAAGTGTGAGATTGATGTGGTTACTTATACTACTATGGTTCATGGTTTTGGTGTTGCTGGTGAGGTTAAGAGATCGAAGAGGGTTTTCGATGCGATGGTGAAAGAGGGTTTGGTTCCTTCTGTTGCTACTTACAATGCTTTGATTCAGGTTTTGTGTAAGAAGGATAGTGTGCAGAATGCTTTGTTGGTTTTTGATGAGATGGTGGAGAAAGGGTGTGTGCCTAATTTGACTACTTATAATGTTGTTATAAGAGGTTTGTGTCATGCGGGTGAAATTGAGAGAGGTTTGGAGTTTATGAAGAGAATGGAGGAAAATGGATGTAGGCCAAGTGTTCAGACATACAATGTTGTGATACGTTATTATTGTGATGATGGGGAACTTGAAAAGGGTTTGGAGGTGTTTGAAAAGATGGGGAATGGGACTTGTTTGCCCAATTTGGATACTTATAATATTCTGATTAGTGCTATGTTTGTGAGGAAAAAATCAGAGGATTTGGTGTTGGCTGGGAAGTTGTTGATCGAGATGGTTGGTAGAGGTTTCTTGCCCCGTAAGTTTACTTTTAATCGGGTGTTAAATGGACTTGTTCTAACGGGGAATCGAGAATTTGCAAATGAGATATTAAGAATGCAAAGCAGGTCTGGCCGTGTTCTTCGTCATGTGAAATTATGA 1464 0.4344 MLNQLLVKPTQRTFTTSRFWFPFTTVVESPPPSIDATVAKLVLESDPKTLSQTLSNPTFQWTPHLVNNVLKRLWNHGPKALQFFKHLDRHPTYIHSTTSFEHAVDIAARLREYNTAWALMGRMRALRLGPTPKTFAILAERYATGGKAHKAVKVFLSMHEHGCHQDLNSFNTILDVLCKTKRVEMANNLFKTLKGRFKCDSVSYNIMANGWCLIKRTPMALQVLKEMVERGITPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRSKRVFDAMVKEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVEKGCVPNLTTYNVVIRGLCHAGEIERGLEFMKRMEENGCRPSVQTYNVVIRYYCDDGELEKGLEVFEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVLAGKLLIEMVGRGFLPRKFTFNRVLNGLVLTGNREFANEILRMQSRSGRVLRHVKL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2332 487 PANTHER OS02G0679200 PROTEIN 24 487 - -
Mal2g2332 487 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 235 269 IPR002885 -
Mal2g2332 487 Gene3D Tetratricopeptide repeat domain 36 230 IPR011990 GO:0005515
Mal2g2332 487 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 340 374 IPR002885 -
Mal2g2332 487 Pfam PPR repeat family 166 212 IPR002885 -
Mal2g2332 487 Pfam PPR repeat family 234 281 IPR002885 -
Mal2g2332 487 Pfam PPR repeat family 304 353 IPR002885 -
Mal2g2332 487 Pfam PPR repeat family 374 421 IPR002885 -
Mal2g2332 487 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 375 409 IPR002885 -
Mal2g2332 487 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 270 304 IPR002885 -
Mal2g2332 487 Gene3D Tetratricopeptide repeat domain 322 430 IPR011990 GO:0005515
Mal2g2332 487 Gene3D Tetratricopeptide repeat domain 233 321 IPR011990 GO:0005515
Mal2g2332 487 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 305 339 IPR002885 -
Mal2g2332 487 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 200 234 IPR002885 -
Mal2g2332 487 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 24 487 - -
Mal2g2332 487 TIGRFAM PPR: pentatricopeptide repeat domain 343 376 IPR002885 -
Mal2g2332 487 TIGRFAM PPR: pentatricopeptide repeat domain 272 306 IPR002885 -
Mal2g2332 487 TIGRFAM PPR: pentatricopeptide repeat domain 202 235 IPR002885 -
Mal2g2332 487 TIGRFAM PPR: pentatricopeptide repeat domain 308 340 IPR002885 -
Mal2g2332 487 TIGRFAM PPR: pentatricopeptide repeat domain 378 410 IPR002885 -
Mal2g2332 487 TIGRFAM PPR: pentatricopeptide repeat domain 237 271 IPR002885 -
Mal2g2332 487 Pfam PPR repeat 140 163 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2332 Mal-Chr2 29037521 29038984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2332 133 468 Miscellaneous Gene Families AT4G11690 27.976 1.01e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2332 - - adu:107473026 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2332 2 29037521 29038984 Mal2g2332 2 29037521 29038984 ECH