Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2059 ATGGCAAAGAAAATAAAAAAGAGGGGTCGAAGTTCTGTGAAGGAGAAGGCGGTTGTTATCTATCCGTCGCCAAAAAATGTTACGGAATCGTGTAACCCAACTACTGAGTCTGTTGGTGAGGAGGTTTCAGTTGCAAAAGAGACAAATCCTTGCTCTCATCTTGTTATAGGTGTTAAATTAGATATATTGTCTGCTAAGATTGAGTCTTCTGCACCCATAAGGTGTGAAGGCTGCAGGGAAGGGGCGGCTGATAGGAGGGGTGGTAGAGGAAAAGGTAAACATGGGAAGAAGAAAGGCGGTGCATCACTAGACTCAAAATCCGATTCAAAGTCTATATGGGTTTGTTTGGAGTGTGGTCAATATACCTGTGGAGGTGTGGGGCTACCTATAACCCCTAATTGTCATGCAATTGGGCATTCGAAGAAAACTCGGCACCCATTAGTTGTCAATGTTGAAAAACCTCAACTGTGTTGGTGTTTTCGTTGTAATATGCTTATTCAAGTTGATAAAATTGAAAAAACTGATGAAACAAGTAATGTTATATCTGATGTTGTGAAATTGTTAAAAGGACGATCGTCGGAAAAATCTTTAGCAGATATTGAGGATGTTTCCATTGGGGATGGCAGTATTACTTCAGAAATTAAGTCAGGATCTCTGTCTACAAGCGATGCGTATGGACAAGGTGGTTATGTGGTTCGAGGCATGGTTAATCTTGGGAATACTTGTTTCTTTAATTCAATCATGCAAAATCTGCTTGCCATGAATAAATTGCGGGACAATTTTCTAAAGATTGATGCTTTTGTTGGGCCACTGATTAGTTCGTTGAAGAAGTTGTTCACTGAAACAAACCCAGGATCAGGATTCAAAAACATTATAAATCCAAGATCCTTTTTTGGTTGTGTATGTTCTAAGTCTCCTCAATTCCGAGGATATCAACAACATGACAGTCATGAATTGCTCCGTTGTTTACTGGATGGTTTGAGCACTGAAGAACTAGCTGGAAGGAAGCAGAATGGTTCTCTCAAGAGAGATGGGGCCTCTTCAAATACTTTAGTCGATGCTTTATTTGGGGGTCAGATATCTAGTACTGTATGTTGCAATGAATGTGGGCATTCCTCAACAGTGTACGAGCCTTTTTTAGATCTTTCCCTCCCTGTTCCAACTAAGAAACCTCCGCTTCGGAAGGCTCAACAAGTACCCCGAACCAGAAAGACTAAACCTCCACCAAAAAAAGGAGGAAAATCTCGAGTCAAAGTTAACAGGGATGATGGTCCCTTACCCGTTCAAAATGTACCAAGCCAATCATCCAGCCATGTATCATCCTGCCCTGATCAGTCCGACACATCAGTTGCTGGAGAATTGGTGCCTTCTTCTGGTGATTCTACGGTATTAGGTTCGGAAGAAGTAAGCAGCGAGGCCAATAAAGAGGACTTATCTCCGCCTAATTTGGTTACTGTTGGAGAGTCTCAACAAATGCAAGGGCTTGACAGTGTTGCAAATAAAACGTTAGATTCATCAGATGATTTTGCGTGGTTGGATTACGTGGAAGCTGAAACCGTAATAGATGATTTTTCATGGTTGGATTATGTGGAAGCTGAAACCGTAATAGATGAATATACTTCCATATCCCAGAAGGAAGATGCACCGGAGGTACAGGACTCTGAGAACAAGGATGAACGTTTGACTGCATTCCCTGAACAAGCTATCTGTGAAACCAGTGGTACTGTTTGTTTCCTAAAGGAGGATGGAAACCTAAGACCTGATTTTTCTTCATCAAATGGGCGGGAAGATGAGGTTCCTTTACAAGTTCAAAATTCAGAAGTGCTGTTACTTCCATACAAAGAAGAAAGTTCCTCAGCCGGAGACATCACTGGAAGAGATGGGGGGGACTCCTCATCTGTTTTAGGTGGTGGTCCAGAAGAAGCAGAGTTTGATGGCTTTGGTGGCTTATTTAATGAGCCTGAAGTTTTTGCTGGGCCTGCTCCCAGACCTTCTTCATCCGGTGATGTGGAAGCTGGCAATATCATTAGAAACATCAGTGAATCTGATCCAGATGAAGTAGATGATACAGATTCTCCAGTCTCTGTAGAGAGTTGCTTGGCACATTTTATAAAGCCTGAGCTTCTTTCAGATGAAAATGCTTGGCATTGTGAGAACTGTTCAAAAATCCTCCAACGTCAAAAGAAGAAAGCAAAAGAGCAGGCAAAAACTCTATCCGATGGAAATGCGAGTGGTAGTCATGACGAATCATGGCATGCATCTAACCCGTGTTTTTTTAAAGTCAGTAGTTGTACAGGAAATGGAGATATTAAAAATGACAAGATTATAGAAAGTTCAGTTTCACATGTTCAGCATGGTACAGAGCTTGAAAACGGTCAAACACTGCACAGTGGTGAATTACAGTCTTCATGTTTACAACAGGCTTGCAATGAAGAAAGCTGCAATAATCCAGATGTTGATTCTTCTATTACTGGAAATGTCCAACGAGATGCTCCAATGTTAGATAATGATGACAATGTCTCAGAAGAATGCAATGACAAAGAGACCGACTTGGAAAGCATGAGAGTGAATAGGGATGCAACTAAGAGGGTCCTCGTTTATAGAGCTCCGCCTGTCTTGACCATTCATCTGAAGAGATTCAGCCAAGATGCTCGTGGCCGCTTAAGTAAATTAAATGGCCATGTCAACTTCAAAGAAACAATGGATCTTAGACCATATATGGATCCCAGGTGTATAAATGAAGAGAAGTATGAATACCAGTTGGTTGGTGTAGTGGAACACTCGGGAACCATGAGAGGGGGTCACTATGTTGCTTATGTGAGAGGGGGCCAAAGGAACAGAGAGAAGGTTGATAATAAAGAGCACGAGAGTTCCACATGGTATCATGCGAGTGATGCATATGTGCGCGAAGTCTCCCTTGATGAAGTTCTTCGCTGTGAGGCATACATTTTGTTTTATGAAAGAAACTGA 2970 0.4182 MAKKIKKRGRSSVKEKAVVIYPSPKNVTESCNPTTESVGEEVSVAKETNPCSHLVIGVKLDILSAKIESSAPIRCEGCREGAADRRGGRGKGKHGKKKGGASLDSKSDSKSIWVCLECGQYTCGGVGLPITPNCHAIGHSKKTRHPLVVNVEKPQLCWCFRCNMLIQVDKIEKTDETSNVISDVVKLLKGRSSEKSLADIEDVSIGDGSITSEIKSGSLSTSDAYGQGGYVVRGMVNLGNTCFFNSIMQNLLAMNKLRDNFLKIDAFVGPLISSLKKLFTETNPGSGFKNIINPRSFFGCVCSKSPQFRGYQQHDSHELLRCLLDGLSTEELAGRKQNGSLKRDGASSNTLVDALFGGQISSTVCCNECGHSSTVYEPFLDLSLPVPTKKPPLRKAQQVPRTRKTKPPPKKGGKSRVKVNRDDGPLPVQNVPSQSSSHVSSCPDQSDTSVAGELVPSSGDSTVLGSEEVSSEANKEDLSPPNLVTVGESQQMQGLDSVANKTLDSSDDFAWLDYVEAETVIDDFSWLDYVEAETVIDEYTSISQKEDAPEVQDSENKDERLTAFPEQAICETSGTVCFLKEDGNLRPDFSSSNGREDEVPLQVQNSEVLLLPYKEESSSAGDITGRDGGDSSSVLGGGPEEAEFDGFGGLFNEPEVFAGPAPRPSSSGDVEAGNIIRNISESDPDEVDDTDSPVSVESCLAHFIKPELLSDENAWHCENCSKILQRQKKKAKEQAKTLSDGNASGSHDESWHASNPCFFKVSSCTGNGDIKNDKIIESSVSHVQHGTELENGQTLHSGELQSSCLQQACNEESCNNPDVDSSITGNVQRDAPMLDNDDNVSEECNDKETDLESMRVNRDATKRVLVYRAPPVLTIHLKRFSQDARGRLSKLNGHVNFKETMDLRPYMDPRCINEEKYEYQLVGVVEHSGTMRGGHYVAYVRGGQRNREKVDNKEHESSTWYHASDAYVREVSLDEVLRCEAYILFYERN* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2059 989 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 3 988 - -
Mal2g2059 989 MobiDBLite consensus disorder prediction 737 751 - -
Mal2g2059 989 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 46 186 IPR013083 -
Mal2g2059 989 MobiDBLite consensus disorder prediction 731 751 - -
Mal2g2059 989 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 233 989 IPR028889 -
Mal2g2059 989 SUPERFAMILY Cysteine proteinases 232 988 IPR038765 -
Mal2g2059 989 Gene3D Cysteine proteinases 678 741 - -
Mal2g2059 989 ProSiteProfiles Zinc finger UBP-type profile. 49 185 IPR001607 GO:0008270
Mal2g2059 989 MobiDBLite consensus disorder prediction 383 482 - -
Mal2g2059 989 MobiDBLite consensus disorder prediction 81 106 - -
Mal2g2059 989 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 1 3 988 - -
Mal2g2059 989 Gene3D Cysteine proteinases 761 989 - -
Mal2g2059 989 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 234 249 IPR018200 GO:0004843|GO:0006511
Mal2g2059 989 CDD Peptidase_C19K 798 987 - -
Mal2g2059 989 Pfam Ubiquitin carboxyl-terminal hydrolase 234 986 IPR001394 GO:0004843|GO:0016579
Mal2g2059 989 MobiDBLite consensus disorder prediction 815 850 - -
Mal2g2059 989 SUPERFAMILY RING/U-box 50 167 - -
Mal2g2059 989 MobiDBLite consensus disorder prediction 396 414 - -
Mal2g2059 989 SMART Zf_UBP_1 103 156 IPR001607 GO:0008270
Mal2g2059 989 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 919 936 IPR018200 GO:0004843|GO:0006511
Mal2g2059 989 Gene3D Cysteine proteinases 220 406 - -
Mal2g2059 989 MobiDBLite consensus disorder prediction 427 482 - -
Mal2g2059 989 MobiDBLite consensus disorder prediction 815 829 - -
Mal2g2059 989 Pfam Zn-finger in ubiquitin-hydrolases and other protein 75 168 IPR001607 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2059 Mal-Chr2 25288109 25291397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2059 793 988 Miscellaneous Gene Families AT2G24640 31.905 2.23e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2059 K11844 - gmx:100776156 1321.99