Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2050 ATGACTGCCAAGTTTGATTCAACGTCTGCTTCCGAACCTCACAAGATGTCTGGAGCTACGTCTACAACACCTACTAGTGGTGGCCAAAAGCTCTCAAAATTTGGTGCCAAATCGGGATTTGTCATCCCAAAAAACAAGTTATTAGGATCGTTGGTCCCCATTATCCGAGGGGTTAAAAAGGAGGCGGTCACTGGAGTTATCAATGAAGAAAGTTCAAAACAAACTGAGAGGAGATCAAGATGGGGGCCTGATCCGACACAGGATGCATCTGTCAGGAAGGCAAAGGTTTTGGCATTGAAGATTCGAGTAGACCAAATTTCAAAGATGTTGGAGTCGGAAAATCCAGGAGACACTCAGAACTCACCATTGGTGGATGAGAACCCAGGTGAAAGCAAGTCTGGCTCTCAAATTAATAGCAAGTCAGAAATGCTCGAACTTGAGAAGAGGGAAGCAATAGGTGAAATTATAAAATTAGATCCCAGTTACAAGCCTCCACCTGGTTTTAAACCGCTGTTAAAAGAAGACAGTGTTCCTTTGCCTGTCCAAGAGTATCCTGGGTACAAATTTATTGGTCTAATATATGGGCCTGAAGGTGATAATCAAAAGCGACTAGAGAAGGAAACTGGTACCAAGATAAAAATTCATGGAACCAAAGCAGACACAGGAGAGAAAAGTGAAATTAAACCAGGTACTGATGTCCAGTGCAGTTACAAAGAGATGCATGTTAACATATCAGCTGATAGTTTTGATAAAGTGGATGCAGCAATTTCCATCATTGAACTACTAATTTCCTCTGTAACTGGGAATTCAGCTGCTGGTTCCGCACCTTCTGTATCTGTTTCTGGGGACAGCACTAATGTTTTGAATCAAAACCAAGATGCCACCCCTTCTCATGCAATTTCTATTTCTCTGGAAAACCAGGCTGTGTTTCAACCAGCAGCCAATACACAAATGCATGGAGATCACTTTCAATACTCTGGTTCATGGTTTTCACCCTTACCATCTCATCCCCCTTTATTTGCTTCTTCTGGCAATGTAGTTCCCTCAAATCCACGACACTTTGCTAGAACTCCCCATTTTCCATCACAAACAATGAGCGCTTCAAATCTGATTTCAGCTTTTGGGGCTCAACCTGCACCTGTTTCTGAATTCCACCCGATTATTCCAAATCAGCAGTTTTCTATGCAAGCACCACCACCGACACAAATCTTACAGCACCCACAATGGACTCAAACAGCTCTTTTTGGTCAAGTTAGGCCACCAAGAAATCCTTCTGTAATACCTGCACAGAATTTGTCAGAACCAACAAATGCTTCACTGTCATTTCCAGTTTCTTTAAGCCAACCAACACCAACAGGACAACTCCGAACATCAGTCTCTTCATCACCTCAACCTATGTCTGGTATATCGCCGTCACCTATAGCTAACCAGCCATTAACCCCTCACGGTGTATCATCTGGACTGAGTGGAGGACCCATCAATGTTAACATGCCTGTAGGTCTCAGCAATATGGGGCCGATGGCTCCACCGGCAGTTCTCCCTACTAGACCCATTTCTCTAGGTCCACAGCCAGATGTTGAATATAAGCCACCCCAGCCAAATGTGTTGATGATGCCACGACCTGGCGGTATTCATCCACATCATGCAGGAATGTCATCTAGACCACCATCATCTTTGGGACCAACACCAGGAACTGTTCATTCAACTGGAAACCATTTATCAGGACCTGTTTCATTTCCTTCGCCAGGAATATCCCCTCCACTTCCATTAGGTCAGCAGTCAGGAATACCTAATTCTGCCTCTCAATACACCCACGTAAAACCACTGGCCTCCATGCCTTCAAATTCTGGAAATTTTACTTTTCAAGGGCAGCGGCCCAGTACAGACTACTATCAATTGGTTCCCAGACCAAACAGTCAGGCTACTACTCAGGGTGGTACACAAGAGCCACCTTCCGGTCCACAACCGCCGCCATTTAGGTTTGCTGTGCCTGATCAGCCTCTTCAAAGCTTTCAAAGGACACAAGTCTCCAACTGGGTGGATCCAACTCAAGCTTATGTCTCTGCTGCTCCTTTTGGGGGAAGATCGGGTTCTGTCTCAATTCCACCCAGACACCCTGCATTTCCATATGCTGGTCAACCTGCACCAAGATCTCAAGTCCCACAAATGGGTATGAGGAACTTCATTCCTTCCCCTCAAATGCCAAACTTGGCCAGTCCTGATGTCCAAAGAGGTATGCACAATCAACAAAGCTATCCTGCTCAGGGAGCATGGCCTCTGAATCAGCAGTTTGCCAACAATCCCTCCTTGGCGTCCGGTAAGTCAGCACATCCTGCAGACCAAATTTATGATCCTTTTTCACCCACATCTGTTGCACCTCCACACCAGAAAGGTAATCCTGGAAAATGA 2409 0.4533 MTAKFDSTSASEPHKMSGATSTTPTSGGQKLSKFGAKSGFVIPKNKLLGSLVPIIRGVKKEAVTGVINEESSKQTERRSRWGPDPTQDASVRKAKVLALKIRVDQISKMLESENPGDTQNSPLVDENPGESKSGSQINSKSEMLELEKREAIGEIIKLDPSYKPPPGFKPLLKEDSVPLPVQEYPGYKFIGLIYGPEGDNQKRLEKETGTKIKIHGTKADTGEKSEIKPGTDVQCSYKEMHVNISADSFDKVDAAISIIELLISSVTGNSAAGSAPSVSVSGDSTNVLNQNQDATPSHAISISLENQAVFQPAANTQMHGDHFQYSGSWFSPLPSHPPLFASSGNVVPSNPRHFARTPHFPSQTMSASNLISAFGAQPAPVSEFHPIIPNQQFSMQAPPPTQILQHPQWTQTALFGQVRPPRNPSVIPAQNLSEPTNASLSFPVSLSQPTPTGQLRTSVSSSPQPMSGISPSPIANQPLTPHGVSSGLSGGPINVNMPVGLSNMGPMAPPAVLPTRPISLGPQPDVEYKPPQPNVLMMPRPGGIHPHHAGMSSRPPSSLGPTPGTVHSTGNHLSGPVSFPSPGISPPLPLGQQSGIPNSASQYTHVKPLASMPSNSGNFTFQGQRPSTDYYQLVPRPNSQATTQGGTQEPPSGPQPPPFRFAVPDQPLQSFQRTQVSNWVDPTQAYVSAAPFGGRSGSVSIPPRHPAFPYAGQPAPRSQVPQMGMRNFIPSPQMPNLASPDVQRGMHNQQSYPAQGAWPLNQQFANNPSLASGKSAHPADQIYDPFSPTSVAPPHQKGNPGK* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2050 802 MobiDBLite consensus disorder prediction 591 649 - -
Mal2g2050 802 MobiDBLite consensus disorder prediction 744 802 - -
Mal2g2050 802 MobiDBLite consensus disorder prediction 111 141 - -
Mal2g2050 802 MobiDBLite consensus disorder prediction 110 142 - -
Mal2g2050 802 MobiDBLite consensus disorder prediction 555 578 - -
Mal2g2050 802 Pfam KH domain 188 259 IPR004088 GO:0003723
Mal2g2050 802 MobiDBLite consensus disorder prediction 1 33 - -
Mal2g2050 802 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 175 269 IPR036612 GO:0003723
Mal2g2050 802 ProSiteProfiles Type-1 KH domain profile. 188 259 - -
Mal2g2050 802 SMART kh_6 171 264 IPR004087 GO:0003676
Mal2g2050 802 MobiDBLite consensus disorder prediction 69 89 - -
Mal2g2050 802 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 24 797 - -
Mal2g2050 802 MobiDBLite consensus disorder prediction 1 32 - -
Mal2g2050 802 MobiDBLite consensus disorder prediction 418 490 - -
Mal2g2050 802 Gene3D K Homology domain, type 1 168 294 IPR036612 GO:0003723
Mal2g2050 802 MobiDBLite consensus disorder prediction 541 659 - -
Mal2g2050 802 MobiDBLite consensus disorder prediction 744 774 - -
Mal2g2050 802 PANTHER RNA-BINDING PROTEIN RELATED 24 797 IPR045071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2050 Mal-Chr2 25191951 25197841 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2050 K13095 - gmx:100777227 942.184