Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal2g2047 | ATGGCGAAGAAACGTGTCCCCGATTGGCTCAACAGTCCTATCTGGTCCTCCCCCTCCGAACAAAACCGCTTCTCCGCCGTTCCTTACCAATCGGAACCTCCCTCTCCACCACCTGTCACCGTCAAAGAAGATCCTCCAACAATTCAACATTCTCGAACCAATCACAATGCCATTACTACTTCACCTCCCTCTTCTTCATCTTCTTCCGCTTCTACTTCCTCCGCCGATGACATGTCCGTCTCCCGTCAGGCCCAATTGTTAGCCGAGTTATCTAGGAAGGTTATAGATATGCGGGAATTGAGAAGAATCGCTTCTCAAGGGATACCTGATGCTCCTGGTTTACGTTCTACTATCTGGAAGCTTTTGCTAGGGTATCTTCCACCGGACCATGCCCTTTGGTCTTCTGAGTTAGCAAAGAAGAGGTCTCAATACAAACGTTTCAAACAAGACATTCTCATCAATCCTTCAGAAATCACGAGGAGGATGTTCAACTCTGCTAATTACGATGCTGATGACGTTAAATGTGAGACTAGGGGGATGCTTTCTAGATCACAAATCACTCACGGGGAACATCCTTTGAGTCTTGGCAAAACCAGCATATGGAATCAGTTTTTCCAGGACACCGATATCATAGAGCAGATTGACCGCGATGTAAAGCGTACTCATCCAGATATGCACTTCTTCTGTGGTGATTCTCAATTAGCAAAATCTAATCAGGAGGCTTTAAAGAGCATATTAATTATTTTTGCAAAGTTGAACCCAGGTATTAGATATGTTCAAGGGATGAATGAAGTATTGGCGCCTTTATTCTATGTGTTCAAAAATGATCCTGACGAGGAAAATGCAGTCTTTTCTGAAGCCGACACATTCTTTTGTTTTGTTGAACTATTGAGTGGATTCCGAGATAATTTTTGTCAACAACTTGACAATAGTATTGTTGGAATTCGTTCAACTATAACAAGACTGTCTCAGCTTTTGAAAGAACATGATGAAGAACTATGGCGTCATCTTGAGGTCACGACCAAAGTCAACCCGCAATTTTATGCATTTAGGTGGATTACTCTCCTCTTAACTCAAGAATTCAATTTTGCTGACATCCTTCGTATTTGGGACACCCTTTTAAGTGATCCTGATGGAACACAGGAGACACTTCTCCGGATATGCTGCGCAATGCTTATTCTCGTACGTAGGCGCCTCCTGGCGGGTGATTTCACTTCTAATCTCAAGTTGTTGCAAAGTTATCCTTCTACAAACATTAGTCATTTGCTCCATGTTGCCAATCAGTTACGTGTACAGTCAGTCTAA | 1305 | 0.4299 | MAKKRVPDWLNSPIWSSPSEQNRFSAVPYQSEPPSPPPVTVKEDPPTIQHSRTNHNAITTSPPSSSSSSASTSSADDMSVSRQAQLLAELSRKVIDMRELRRIASQGIPDAPGLRSTIWKLLLGYLPPDHALWSSELAKKRSQYKRFKQDILINPSEITRRMFNSANYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQDTDIIEQIDRDVKRTHPDMHFFCGDSQLAKSNQEALKSILIIFAKLNPGIRYVQGMNEVLAPLFYVFKNDPDEENAVFSEADTFFCFVELLSGFRDNFCQQLDNSIVGIRSTITRLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADILRIWDTLLSDPDGTQETLLRICCAMLILVRRRLLAGDFTSNLKLLQSYPSTNISHLLHVANQLRVQSV* | 435 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal2g2047 | 434 | SUPERFAMILY | Ypt/Rab-GAP domain of gyp1p | 87 | 336 | IPR035969 | - | |
| Mal2g2047 | 434 | MobiDBLite | consensus disorder prediction | 1 | 80 | - | - | |
| Mal2g2047 | 434 | PANTHER | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN | 3 | 432 | - | - | |
| Mal2g2047 | 434 | SMART | tbc_4 | 104 | 403 | IPR000195 | - | |
| Mal2g2047 | 434 | ProSiteProfiles | TBC/rab GAP domain profile. | 109 | 377 | IPR000195 | - | |
| Mal2g2047 | 434 | Gene3D | - | 78 | 133 | - | - | |
| Mal2g2047 | 434 | SUPERFAMILY | Ypt/Rab-GAP domain of gyp1p | 314 | 431 | IPR035969 | - | |
| Mal2g2047 | 434 | MobiDBLite | consensus disorder prediction | 12 | 29 | - | - | |
| Mal2g2047 | 434 | Pfam | Rab-GTPase-TBC domain | 207 | 398 | IPR000195 | - | |
| Mal2g2047 | 434 | PANTHER | YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN | 3 | 432 | - | - | |
| Mal2g2047 | 434 | MobiDBLite | consensus disorder prediction | 46 | 80 | - | - | |
| Mal2g2047 | 434 | Gene3D | putative rabgap domain of human tbc1 domain family member 14 like domains | 196 | 305 | - | - | |
| Mal2g2047 | 434 | Gene3D | - | 313 | 433 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal2g2047 | Mal-Chr2 | 25157992 | 25163388 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal2g2047 | K24796 | - | gmx:100778830 | 649.047 |