Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1996 ATGGTTGATCTTTTTGGTTCATGTTTGAGATCATCAGATTGGAAGGCTGCAAACGCATACAGAGATAGTAGACTCATTTACAATGGTAGGGTTCAAGGTCTTAATGCTGGAGGTTTGCTGCTTTGGTTTTACTCTATCATGGGGTTTCTCCCATTCTCACAGTTGAGCCCAGTGCATTTATGTCGAGAACCGGATAAAACTATCGAAGAAATTGCAAAAGAGTTGATCGGTTCCATCTTATCAGTAAAGGTAATCATAGTAGATGAGGAGAAAAGGAAATTGGTCTTATCTGAAAAGGAAGCTTCATGGTTTAAATATTCAAAACATGTCAACATAGGGGACCTTTTTGAAGCAAGAGTCGGTGCTGTTGAGGACTATGGTGCTTTTGTTCATCTGCGCTTCCCTGACGGTCTTTATCACATTACCGGACTAATACATATCTCAGAAGTGTCGTGGGATCTAGTTAAAGATGTAAGAGACTTCTTAACAGAAGGCGAAGAAGTGAGGGTCAAAGTTATCAATATTGATACTGTAAAATCGAAGATTGCACTGTCAATGAAACAGCTAGAAGAAGATCCACTACTAGAAACTCTGGACAAAGTAATACCTCAGAGATCATCAGATTGGAAGGCTGCAAACGCATACAGAGATAGTAGACTCATTTACAATGGTAGGGTTCAAGGTCTTAATGCTGGAGGTTTGCTGCTTTGGTTTTACTCTATCATGGGGTTTCTCCCATTCTCACAGTTGAGCCCAGTGCATTTATGTCGAGAACCGGATAAAACTATCGAAGAAATTGCAAAAGAGTTGATCGGTTCCATCTTATCAGTAAAGGTAATCATAGTAGATGAGGAGAAAAGGAAATTGGTCTTATCTGAAAAGGAAGCTTCATGGTTTAAATATTCAAAACATGTCAACATAGGGGACCTTTTTGAAGCAAGAGTCGGTGCTGTTGAGGACTATGGTGCTTTTGTTCATCTGCGCTTCCCTGACGGTCTTTATCACATTACCGGACTAATACATATCTCAGAAGTGTCGTGGGATCTAGTTAAAGATGTAAGAGACTTCTTAACAGAAGGCGAAGAAGTGAGGGTCAAAGTTATCAATATTGATACTGTAAAATCGAGGATTGCACTGTCAATGAAACAGCTAGAAGAAGATCCACTACTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTCAGCTGCTCCCGAGTCATTCAGCAGTAGTACTAGCAGTCCTATCGATCCCCTACCAGGGCTGGATACAATTCTTGAAGAGCTACTGCAGGAAGATGGCATATACGATGCAAGAATCAGCCGTCAGGGGTTTGAAAAACGAGTGGTCTCACAGGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCATGGACAAAAGATTTACACTCCTTGCTCGAGCTGGAAGACAGGTGCAGGAGATACATCTGAAAACATCCCTTGATCAGGAAGGCATCAAAAAGGCAATACAACTAGTATTGGAGCGTGTTTCCTGA 1515 0.4139 MVDLFGSCLRSSDWKAANAYRDSRLIYNGRVQGLNAGGLLLWFYSIMGFLPFSQLSPVHLCREPDKTIEEIAKELIGSILSVKVIIVDEEKRKLVLSEKEASWFKYSKHVNIGDLFEARVGAVEDYGAFVHLRFPDGLYHITGLIHISEVSWDLVKDVRDFLTEGEEVRVKVINIDTVKSKIALSMKQLEEDPLLETLDKVIPQRSSDWKAANAYRDSRLIYNGRVQGLNAGGLLLWFYSIMGFLPFSQLSPVHLCREPDKTIEEIAKELIGSILSVKVIIVDEEKRKLVLSEKEASWFKYSKHVNIGDLFEARVGAVEDYGAFVHLRFPDGLYHITGLIHISEVSWDLVKDVRDFLTEGEEVRVKVINIDTVKSRIALSMKQLEEDPLLETLDKVIPQDGSAAPESFSSSTSSPIDPLPGLDTILEELLQEDGIYDARISRQGFEKRVVSQDLQLWLSNAPPMDKRFTLLARAGRQVQEIHLKTSLDQEGIKKAIQLVLERVS* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1996 504 ProSiteProfiles S1 domain profile. 219 294 IPR003029 GO:0003676
Mal2g1996 504 PANTHER OS03G0844900 PROTEIN 10 206 - -
Mal2g1996 504 PANTHER OS03G0844900 PROTEIN 204 504 - -
Mal2g1996 504 SUPERFAMILY Nucleic acid-binding proteins 221 294 IPR012340 -
Mal2g1996 504 Pfam S1 RNA binding domain 111 187 IPR003029 GO:0003676
Mal2g1996 504 Pfam S1 RNA binding domain 306 382 IPR003029 GO:0003676
Mal2g1996 504 SMART S1_6 111 187 IPR022967 -
Mal2g1996 504 SMART S1_6 217 294 IPR022967 -
Mal2g1996 504 SMART S1_6 22 99 IPR022967 -
Mal2g1996 504 SMART S1_6 306 382 IPR022967 -
Mal2g1996 504 Gene3D - 14 105 IPR012340 -
Mal2g1996 504 Gene3D - 209 300 IPR012340 -
Mal2g1996 504 Gene3D - 106 189 IPR012340 -
Mal2g1996 504 Gene3D - 301 384 IPR012340 -
Mal2g1996 504 ProSiteProfiles S1 domain profile. 113 187 IPR003029 GO:0003676
Mal2g1996 504 SUPERFAMILY Nucleic acid-binding proteins 306 395 IPR012340 -
Mal2g1996 504 ProSiteProfiles S1 domain profile. 24 99 IPR003029 GO:0003676
Mal2g1996 504 ProSiteProfiles S1 domain profile. 308 382 IPR003029 GO:0003676
Mal2g1996 504 SUPERFAMILY Nucleic acid-binding proteins 26 99 IPR012340 -
Mal2g1996 504 SUPERFAMILY Nucleic acid-binding proteins 111 200 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1996 - - gmx:100786308 460.685