Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1980 ATGTCTCAGGTTGATAGCAGAAATTCTTCCGCTGCTAAGCGTGCTAGGACCGATGGTAGCCGCAGGGAAGATGACTGGACATGTCCCAGCTGCGGTAATGTCAATTTCTCTTTCAGGACAACCTGTAACATGCGTAACTGCACCCAACCAAGGCCTGCTGATCATAATTCTAAATCTGCTGTGAAGCCTCTTCAAGCTCCACAGGCATATTCATCTGCAGCTCCTTATTTAAGCTCCAATGCTCCTCCTTCAATTTATATCGGTGCCCCACCATATGGGTCTTTATTCAATGGATCACCTGTTCCTCCCTATGAGGTTCCATTTTCTGGAGGATCAGCCTATCACTACAGTTATGGAAGCCGTCTTCCTGCTGGCAGTCCGTATAGACCATTGCATATAGCAGGACCAGCACCATACACAAGTGGATCCATGGTGGGAAACGGTGGGATCTATGCCATGCCTCAGCTACTGGATCGTTATGGCCTCGGTGTCCCTATTGGACCTGGACCAATGGGCACTAGGCCAGGATTTTTTCGCGATGATAAGTCTCAGAAAAAGGGAGCAGATGCAACTCGTGACAATGATTGGGCATGTCCAAAATGTGGCAACGTTAATTTCTCGTTTAGAACTGTTTGCAACATGAGAAAGTGCAATACACCCAAGCCTGGATCCCAGGCCTCAAAGTCTGACAAGAACTCTAAGCAAAAGATGCCCGAGGGAAGCTGGAAGTGTGAAAAATGTAATAACATAAATTACCCATTCCGAACCAAGTGCAATAGACAGAATTGTGGTGCTGACAAGCCAGCTGAGTCGGAAAAATCTCCCTCATCATCTCCAGATCAAAATGATCAGGGGAAACTTGACTCAAAGGGTTCACTGAACAACTGA 888 0.4685 MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAVKPLQAPQAYSSAAPYLSSNAPPSIYIGAPPYGSLFNGSPVPPYEVPFSGGSAYHYSYGSRLPAGSPYRPLHIAGPAPYTSGSMVGNGGIYAMPQLLDRYGLGVPIGPGPMGTRPGFFRDDKSQKKGADATRDNDWACPKCGNVNFSFRTVCNMRKCNTPKPGSQASKSDKNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSSSPDQNDQGKLDSKGSLNN* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1980 295 MobiDBLite consensus disorder prediction 263 295 - -
Mal2g1980 295 MobiDBLite consensus disorder prediction 219 241 - -
Mal2g1980 295 MobiDBLite consensus disorder prediction 271 295 - -
Mal2g1980 295 Gene3D - 186 224 - -
Mal2g1980 295 Gene3D - 227 270 - -
Mal2g1980 295 Gene3D - 14 54 - -
Mal2g1980 295 SUPERFAMILY Ran binding protein zinc finger-like 232 269 IPR036443 -
Mal2g1980 295 SUPERFAMILY Ran binding protein zinc finger-like 187 224 IPR036443 -
Mal2g1980 295 PANTHER ZINC FINGER PROTEIN 5 277 - -
Mal2g1980 295 Pfam Zn-finger in Ran binding protein and others 238 268 IPR001876 -
Mal2g1980 295 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Mal2g1980 295 Pfam Zn-finger in Ran binding protein and others 193 222 IPR001876 -
Mal2g1980 295 MobiDBLite consensus disorder prediction 11 25 - -
Mal2g1980 295 MobiDBLite consensus disorder prediction 172 192 - -
Mal2g1980 295 MobiDBLite consensus disorder prediction 1 27 - -
Mal2g1980 295 MobiDBLite consensus disorder prediction 178 192 - -
Mal2g1980 295 SMART zf_4 24 50 IPR001876 -
Mal2g1980 295 SMART zf_4 194 220 IPR001876 -
Mal2g1980 295 SMART zf_4 240 266 IPR001876 -
Mal2g1980 295 PANTHER OS08G0521400 PROTEIN 5 277 - -
Mal2g1980 295 SUPERFAMILY Ran binding protein zinc finger-like 17 54 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1980 Mal-Chr2 24041605 24049424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1980 179 271 EF-hand Containing Proteins AT1G55040 32.258 7.31e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1980 - - gmx:100796535 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1980 2 24041605 24049424 Mal2g1980 2 24041605 24049424 ECH