Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1972 ATGCGAACCAGAAAACGTTTGTGTTATCCTCTACCATTTTCAAAGATGTGTTCAGACACAACCACAATCTCTATTCAAACTAACAAAACTAACAAAAGACAGAAGAGAATGCCAGAAAACATCTCTGTTCAATCTTCTGATTTCTTTGAACTTTTGCCTGATGACTTAATACTCTCCATCCTTGGCAAGCTTAGCTCCACAGCAACTTCTCCTTCAGATTTTATCAATGTTCTAATCACGTGCAAGAGATTAAACGGATTAGGTTTAAACCCTGTTGTTTTGTCGAAAGCATCGAACAAAACATTATCAGTCAAAGCTAAAAACTGGTGTGAATCTGCTCACCGTTTCCTCAAACGCTGTGCTGATGCTGGAAACATTGAAGCTTGTTACACTCTTGGAATGATTCGGTTTTACTGTTTGCAAAACAGAGGAAGCGGCGCGTCGTTGATGGCGAAATCAGCAATGAAGTCTCACGCGCCGTCGCTGTATTCACTAGCAGTGATACAGTTCAATGGAAGTGGAGGAACAAAAAACGACAAAGACTTACGCGCCGGTGTGGCTCTATGTGCACGTGCTGCATTCCTCGGCCATATTGATGGTTTACGTGAGCTTGGTCATTGTTTACAAGACGGTTACGGAGTTAAGCAGAACGTTATAGAAGGAAGAAGATTTCTTGTTCAAGCTAACGCACGTGAACTCGCTGCCGTTTTATCTAACGGCAACAAGAACAAACAACCGTTGCTAACGTGGAGTGTTAACCCGGTTGCAAACCAGCCACCTCAGCTTCTAGTTATAGCTGGTGCTGTTGCTGGTTCTGGTTCGGGTTGTCCTTTGCTTAGTGATTTTGGGTGTAACGTTCCGGTTCAGGAGACTCACCCGGCGAACCGGTTTATGATTGAGTGGTTCGATATTCGAGGTGGGTTTCCTGGACCGGGTATGAGGCTGTGTTCGAATTCGGGTTGTGGAAGGCCTGAGACAAGGAAGCACGAGTTTCGAAGGTGTTCGGTTTGTGGGGTGGTGAATTATTGCTCACGCGCTTGTCAAGCGCTTGATTGGAAGTTTCGACACAAGGCAGAGTGTGCTCCGGTGGAGAGGTGGATGGATGAGGAGGCGGAAAATGTTGCTGGTGAGGGTGACGGTGGCGTTAACGTTGATGAGGTGGTTGTGCTTGATAGTTGA 1179 0.458 MRTRKRLCYPLPFSKMCSDTTTISIQTNKTNKRQKRMPENISVQSSDFFELLPDDLILSILGKLSSTATSPSDFINVLITCKRLNGLGLNPVVLSKASNKTLSVKAKNWCESAHRFLKRCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKSAMKSHAPSLYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDGLRELGHCLQDGYGVKQNVIEGRRFLVQANARELAAVLSNGNKNKQPLLTWSVNPVANQPPQLLVIAGAVAGSGSGCPLLSDFGCNVPVQETHPANRFMIEWFDIRGGFPGPGMRLCSNSGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWMDEEAENVAGEGDGGVNVDEVVVLDS* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1972 392 Gene3D Tetratricopeptide repeat domain 92 249 IPR011990 GO:0005515
Mal2g1972 392 Pfam MYND finger 320 360 IPR002893 -
Mal2g1972 392 ProSiteProfiles Zinc finger MYND-type profile. 318 360 IPR002893 -
Mal2g1972 392 SUPERFAMILY HCP-like 110 228 - -
Mal2g1972 392 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 29 392 - -
Mal2g1972 392 SUPERFAMILY HIT/MYND zinc finger-like 316 365 - -
Mal2g1972 392 SUPERFAMILY F-box domain 34 94 IPR036047 GO:0005515
Mal2g1972 392 Gene3D - 311 364 - -
Mal2g1972 392 PANTHER MYND DOMAIN-CONTAINING 29 392 IPR044508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1972 Mal-Chr2 23944995 23946367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1972 - - gmx:100798136 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1972 2 23944995 23946367 Mal2g1972 2 23944995 23946367 ECH