Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1971 ATGGCCACCCACGAGGTTGAGAACAAGAACAAAGAACTAACGCGTCTAGGGTTTGTAAAGGTTGCTGCTATTCATACTTACGTGTTTGTCTCATATCTGTATGAATCCGCTAAGAAGAACTCGGGACCTTTGAGATCCGCTGTTGAAACCGTGGAGGGAACAGTAACCAATGTTATTGGTCCTGTCTACAACAAATTCAAGGGTGTCCCTGATGATGTCCTTGTTTTTGTTGACAACAAGGTGGATGAAGCTCCTCATATTGCTAAGCAGCTTGCGGACCAAACAAAAATTTTGATTCAGAAAGCAACACATGAGGCAGGGAAAGTTGTGAGTGTCGGTCGATCTGGAGGACCAAGAGCAGCTGTAGATTATGTTGCTACAGAGACCAAGAATTTGCTACTAATCAATTCAGTGAAGCTGTGGACTGGACTCAACAAATTTCCACCATTCCATGCAGTAGCAGAGATGGCAATTCCAACTGCTGCTCACTGGTCTGAGAAATACAACCATGCAATCAAGGATATGACTGAAAAGGGTTATAGTTTTGTTGGGTATTTACCTTTGATTCCTATTGATGATATATCTAAGGCATTTAAGCAGGGAGAAGTTAAGGAAAAGAAATCAGACTAA 630 0.4206 MATHEVENKNKELTRLGFVKVAAIHTYVFVSYLYESAKKNSGPLRSAVETVEGTVTNVIGPVYNKFKGVPDDVLVFVDNKVDEAPHIAKQLADQTKILIQKATHEAGKVVSVGRSGGPRAAVDYVATETKNLLLINSVKLWTGLNKFPPFHAVAEMAIPTAAHWSEKYNHAIKDMTEKGYSFVGYLPLIPIDDISKAFKQGEVKEKKSD* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1971 209 PANTHER RUBBER ELONGATION FACTOR-RELATED 2 209 - -
Mal2g1971 209 Pfam Rubber elongation factor protein (REF) 8 200 IPR008802 -
Mal2g1971 209 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 2 209 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1971 Mal-Chr2 23930783 23932531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1971 - - mtr:MTR_3g085370 372.474