Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1959 ATGTCGCTCGCATCATTCTCCATCATCCGCCACCACCGCACGGTGGCCGCCGCCGCCCCTCAACTTCTCCGACACTTCCGCCACTTCCAAATCTCCGCCAGAAACCAAAACCCTAAACACGAAGCCCCAAGCAAGAATCTCCTCAAAGCAAAACACACCTTAAAAGACTTCTCTTCTCTCGCTCCCATCCTCTCACTCGACGAAAATCCTCCTCTCTCCGAATCCCAAACCGTCGGCGTCGTCGCTTCTTCCCAAGCCAATTTCATGCGCGTTATCGTCCAATCCCAACCTTCCGGAACCTTCCACGACGCTTCGTTCTACGGAGGAGTTGAACTGTTATGCGTTGTGAGAGCGTTGCTGAAGAAGATAAAGCGTAGGGTTATGGTTGGTGATAAGGTTCTAGTAGGTTCTGTTGATTGGGTGGATCGTAGGGGTATGATTGAGAATGTGTTTCAGAGAAATTCTGAGATGCTTGATCCTCCTGTGGCTAATGTGGATCATTTGCTTGTTCTGTTTTCGCTTGATCAGCCTAAGCTTGAGCCTTTTACACTCACGAGATTTTTGGTTGAAGCTGAGTCTACTGGGATTCCTTTAACTCTTGCGCTTAACAAGACCGAGCTCGTGGATAAAGAGACCATGGATTCCTGGAAGGCTAGGTTTCGTGGCTGGGGCTACCAGCCAATTTTTTGCAGTGTTGAGTCCGGACATAACCTTGATCTTCTTGCGTTCCAATTGAGAGATCAAACAACAGTGGTTGTGGGTCCTAGTGGAGTTGGGAAGTCTAGTTTGATCAACGCCCTTAGAAGCAATCCCCGTACTCGTGATACTGCAGATGGGGAGAATTGGTTTGAACCTATTTTAGGTAGCAAGTGGTATGACGACCAACGAGTTGCGGAGGTTTCAACAAGAAGTGGCAGGGGGAAGCATACTACTCGTCATGTCTCTCTTCTTCCATTAACTGGAGGGGGTTATCTTGCTGATACTCCTGGATTTAACCAGCCTAGTTTATTGAAAGTGACAAAGCAATCTCTTGCACAAACTTTTCCTGAAATCAGGAAAATGCTTGGTGGAAATGAGTCTGCCAAATGTTCATTTAACAATTGCTTGCATCTTGGTGAACCTGGCTGCATTGTGAAGGGGGATTGGGAAAGATATTCATTCTATTTTCAACTTCTTGATGAAATTAGAATCAGAGAGGAGTTCCAGTTGAGGACATTTGGAACTAAAAGAGAAAGTGATGTAAGGTTAAAAATAGGAGATATGGGTTCTCAGCAAGCAGAACCACGTTTGGAGCTTAAGAAGCATAGAAGACAATCTCGGAAGAAGACTAACCAATCAATTTTAGATGATCTCGACGATGACGACAATTTGCTCGACGAGGAGAACGATCCCCTTTTAAATGCTTTAAGGAATGAAAATCCTTAA 1425 0.4554 MSLASFSIIRHHRTVAAAAPQLLRHFRHFQISARNQNPKHEAPSKNLLKAKHTLKDFSSLAPILSLDENPPLSESQTVGVVASSQANFMRVIVQSQPSGTFHDASFYGGVELLCVVRALLKKIKRRVMVGDKVLVGSVDWVDRRGMIENVFQRNSEMLDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTGIPLTLALNKTELVDKETMDSWKARFRGWGYQPIFCSVESGHNLDLLAFQLRDQTTVVVGPSGVGKSSLINALRSNPRTRDTADGENWFEPILGSKWYDDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLGGNESAKCSFNNCLHLGEPGCIVKGDWERYSFYFQLLDEIRIREEFQLRTFGTKRESDVRLKIGDMGSQQAEPRLELKKHRRQSRKKTNQSILDDLDDDDNLLDEENDPLLNALRNENP* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1959 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 396 IPR027417 -
Mal2g1959 474 MobiDBLite consensus disorder prediction 417 474 - -
Mal2g1959 474 Pfam RsgA GTPase 150 336 IPR010914 GO:0003924|GO:0005525
Mal2g1959 474 Gene3D Probable gtpase engc; domain 3 338 400 - -
Mal2g1959 474 ProSiteProfiles EngC GTPase domain profile. 163 332 IPR010914 GO:0003924|GO:0005525
Mal2g1959 474 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 66 456 IPR004881 GO:0003924|GO:0005525
Mal2g1959 474 Gene3D - 151 336 IPR027417 -
Mal2g1959 474 CDD YjeQ_EngC 163 393 IPR004881 GO:0003924|GO:0005525
Mal2g1959 474 TIGRFAM TIGR00157: ribosome small subunit-dependent GTPase A 127 270 IPR004881 GO:0003924|GO:0005525
Mal2g1959 474 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 77 399 IPR004881 GO:0003924|GO:0005525
Mal2g1959 474 SUPERFAMILY Nucleic acid-binding proteins 78 153 IPR012340 -
Mal2g1959 474 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 154 334 IPR030378 GO:0005525
Mal2g1959 474 Gene3D - 72 150 IPR012340 -
Mal2g1959 474 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 1, MITOCHONDRIAL-RELATED 66 456 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1959 K06949 - gmx:100796145 713.761