Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1937 ATGGAGGAGTTACCGGAGTGCCCAGTGTGTCTTCAAAACTACGACGACGAAAACGCGATTCCACGAGTACTCTCATGCGGCCACACCATTTGTGAAGCTTGTCTTGTAGAGCTTCCACCGCGATTCCCAAACACAATTCGTTGCCCCGCTTGTACACAACTCGTTAAATACTCCCCCAAACAAGGCCCTTCTTCTCTTCCCAAAAACATTGATCTCCTCAGAATCTGCCTTCAAGATTCTTCATCTAAAAATCAATCACCAAAATCGAATCAACGGCCCTCGATCAACGATGGCCTTGCTTATTCCTCTATATTCTGGTCTGATGAGTTCTATGTTGATTGGAAGGATTGGATTCTTCCGCACGACGCCGTTTCGATCAATGAGGACGGTTTTGGTAGGTTTAGTTCGAATTCTAAGGGTAGAGTTTGCTTTGGAGTTAACCGTACGGTGAGTTTAGCTCCGATTGTTACTTTCTCTCCGGTTAGTGATTCGAAGTTTAAGTTTAGTTATGTTGCTTGGGTTATCAAGTGTTTGGAGGGGATGAATGAGGTTGTGAGAGAGGGTTTAGGTTTGATTCTAGAAGCTTCGGTGAGGCAGAGTAGGGTGTGTAGGGTTTATGGGTTGTGGAGTGAGGTTGTTGGTGGTACTTTGTATTCGGTGTGTGAGAAGCAATGTGGTAGAGTTTTGGACAAGTTTGGTGGATTGAAGGATGGGTTTCTTGGTTTGGAATTGGATAAAGGTGGGGTTTGTAGTTTTGCTATGATTGCTAAGGGGGTTATTGAAGCTGTGATTGCTTTGAATTTGGAAGGTTTGGTTGCTGGTTGTTTTGGACTTTCGTGTTTCGGTTTTGATGAGCTTGGTGGCGTTTGTATTGATTTGAATGAGGTGTTGGTGATGGGAAGGAAGATTATGGATGCGGTTTCTGCTGGTGCGGGTGATGAACGTGAAGCGATGTGTGCGGATTGTTTGGATTTGGTGAATGAGCTTTTCGTTAGCCCGGAGGTTTTGTCTAAGTTATTTAACAAGGGGGTTATCAGCTCAGAGAGTGGGAATTTGAGATATCCAATTGGGTATGGCTCAGATGTGTGGTCGTTGGCTTGTGTGTTGCTTCGGCTTCTTATTGGAAACGCACTCCCTCGAATTACCTTTGAAATGAGTGGAGAGGATGGCCTTGACGTCTCGGCTAGTTACATTTCTTGGGTGGAAAAGGTTAGTTCTGTTTTGGAAGAAAAAATTGGCTCTGAATACATATCACTTAAGCAGACTCTTTGCAAGTGTTTGGAAATCAATCCGGAAAGTCGTCCAGATGTGGTGGATGTAAGGAAATGCCTTCAGGATGTGTTCGTCAAACATCAATTCGGTTTTTTGGGCGATTCGGAGGTTACAGTAAATAGGAACAACACAGGTCACCTTGTGATTCTTGCCAAGTTGTGTCAGTTGCTTGAGGAAAGTTCTAAGGAGCCGAGAGAACACGAGTTGCATGCTAAAGAAGATGGTGGTCAACCTGATATTCTTCAAGGTGCGGAAAATATATCTGATGAAGACTTCACTTCTAGCTTATCTCAGGGAATGATCGAGCTTAAAGATCTGCAAGGCCATCTTGGTTGTATCACCGGATTAGCTGTAGGAGGGGGATATCTATTTAGCTCCTCTTTCGATAAAACTGTCCGTGTATGGTCCTTGCAGGACTTTTCTCATTTACACACATTTAGAGGTCATGAGAATAAAGTCATGGCTCTAGTTTATGTTGATGACGAAGAACCGTTGTGTATAAGCGGTGACGGTGGTGGGGGTATATTTGTCTGGGGGATTGATGCACCTCTTAGGCAAGATCCCTTAAGGAAATGGTATGAGCAGAAGGATTGGCGCTTTAGTGGTATCCATTCCTTGACTGCTTTTGGAAATCTTCTCTACACTGGAAGTGGAGATAGAACAATCAAAGCTTGGTCATTGAAGGATGGAACTTTGATGTGCACAATGGATGGCCACAAATCAGTAGTTTCCACACTTTCAGTATGTGATAAGGTTCTTTACAGTGGTAGTTGGGATGGAACCGTCCGACTGTGGAGTCTTGATGATCACAGCCCGTTGGCGGTGCTAGGGGAAGATCTGCCTGGAGAGATGAAGTCTATCCTGGCTATTACTGCCAATAGGGGTTTGCTGGTTGCAGCATATGAGAATGGTTGCATTAAGGTCTGGAGAAACGATGCGTTAATGAGTTCCAAAACATTGCATAATGGTGCCATTTTTGCTATGAGCATGCAGGGAAAATGGCTTTATACAGGAGGTTGGGACAAAAATGTTAATATACAGGAATTATCAGGAGATGAGTTAGAACTGACTGTCAACGCATTTGGATCCATTCCTTCCAGTTCTGTTGTGACTGCTATATTATGCAGCCAAGGAAAACTTTATGTTGGATATGGTGACAAGTCTATCAAGGAAAATATTGGTCGCATTCATAAGACTTTCACTGACTTCACCAGCTTGAACCATTGGGTCGTTGACGACTACTTCCGTCTTGTCAACTCCGTCAATGCATTCGAGCCTCGGATTCAGGCGCTATCCGACGAGCAGTTGGCTGCCAAAACCGAGGAGTTTCGCCTCCGGCTCAAGCGAGGGGAGACGCTTGCAGATATCCAAGCTGAGGCGTTCGCTGTTGTTCGTGAGGCTGCCAGAAGAAAACTTGGAATGCGCCATTTTGATGTTCAGATTATCGGTGGAGCTGTGCTGCATGATGGGTCCATTGCTGAAATGAAAACGGGAGAGGGGAAAACCTTAGTTTCCACGCTAGCAGCATATCTTAATGCCCTGACCGCTGAGGGTGTCCATGTTGTAACTGTCAACGATTATTTAGCTCAACGTGATGCTGAATGGATGGGGCGTGTTCATCGTTTCTTAGGTCTCTCTGTTGGTCTTATTCAGAAGGGGATGAATTCTGAAGAGCGGAGATTCAACTATAGATGTGATATAACATATACCAATAATTCGGAGCTTGGCTTCGATTACTTGAGAGATAATCTTGCTGGAAATAGTGAACAGCTTGTGATGAGATGGCCAAAACCATTTCATTTTGCTATTGTTGATGAGGTGGATTCAGTCCTGATAGATGAGGGAAGAAATCCGTTGTTAATCAGTGGTGAGGCTAGCCAAGATGCTGCACGATACCCTGTTGCTGCAAAAGTGGCCGAATTGCTTACACATGACATTCATTACAAAGTGGAACTCAAAAATAATTCGGTGGAGTTGACCGAGGAAGGAATTACTCTTGCTGAAATGGCTCTCGAAACAAATGACCTTTGGGATGAAAATGATCCCTGGGCTAGATTTGTGATGAATGCTTTAAAAGCTAAAGAATTCTATCGCCGTGATGTGCAATACATTGTCAGAGATGGAAAAGCTTTAATTATAAATGAGCTTACAGGAAGAGTTGAAGAGAAAAGGAGATGGTCTGAGGGAATTCACCAAGCTGTGGAGGCAAAGGAATGTTTGAAGATTCAGGCAGATTCTGTTGTCGTGGCACAAATCACATACCAATCATTATTCAAACTTTATCCAAAATTGTCAGGAATGACCGGAACTGCAAAAACAGAAGAGAAAGAGTTCTTAAAAATGTTCCAGACACCTGTCATTGAAGTGCCGACAAATCTTCCTAATATTCGCAAAGACTTGCCTATTCAAGCATTTGCTACTGCTCGGGGGAAATGGGAGCAAGTTCGCCGAGAAGTTGAAGATATGTTTAGACAAGGGCGTCCTGTCTTGGTTGGGACAACTAGTGTAGAAAATTCTGAACTTTTGGCTGGTCTGCTGAGGGAATGGAATATTCCCCATAATGTTCTAAATGCTCGACCCAAGTATGCAGCGAGAGAAGCTGAAGTTGTTGCACAAGCAGGACGGAAACATGCCATTACAATATCTACAAATATGGCAGGCAGGGGCACAGATATAATCCTTGGAGGAAATCCAAAAATGCTTGCCAGAGGAATTATAGAGGACAGTATAGTTCCTTTTTTGACACGGGAGGATCCAACTAGTGAGCTTGCCGGTGAGGCCATTTCAGAAAAGATGCTTCCAAAGATAAAGGTGGGATCATCATCATTAGCCTTACTGGCTAAGACAGCCTTAATGGCAAAATATGTATTGAAAAGTGAGGGTAAAAGTTGGACATATCAGAAGGCTATATCTTTTATCGTGGAGTCTATTGAAATGAGTCTTTCATATAGTTTGAAAGAGCTAGAGAAGCTTGCCAATGAAGAATCTGAGATCTACCCACTTGGTCCAACAGTAGCACTTGCGTATCTGTCAGTTTTAAAGGATTGTGAAGAACACTGTTTGCATGAAGGGTCTGAAGTAAAAAGGCTTGGGGGCCTTCATGTGATTGGTACATCTTTACACGAGTCCCGGAGAATAGACAACCAGCTTCGTGGCAGAGCAGGAAGGCAGGGGGATCCGGGGTCAACACGATTTATGGTCAGCTTGCAGGATGAGATGTTTCAAAAGTTTAATTTTGATAATGAATGGGCTATTAGACTTATATCAAAAATTACAAACGACGAGAGCCTGCCAATTGAAGGTGGTGCCATTGTGAAACAGCTCTTGGCATTGCAAATCAATGTAGAAAAGTTCTTCTTCGGCATAAGAAAGAACCTCGTTGAGTTCGATGAAGTATTGGAGGTGCAACGAAAACATGTTTATGATCTAAGACAGTTAATCTTAACAGGAGATGATGATAGCTGTTCCCAACACATATTACAGTACATGCAAGCAGTGGTGGATGAGATTGTCTTCAGTAACATTGATCCATTGAAGCATCCTCGTAGTTGGGGTTTGAATAATCTCTTGAAAGAGTTCAAGGCAATTGGTGGAAAGCTGTTGCATGAATCATTTGGAGGAATTAATGATGACACTTTACTAGATTCACTTAGGAAACTGAATGAAGTAAATTCAGTCGATGTTGTCAACTTTTGCCTTCCAAATTTGCCAGCACCTCCAAATGCTTTCAGGGGAATTCGCAGGAAGAGCTCTTCATTAAGACGATGGCTTGCTATTTGCACCGATGATTTAATTGAGAATGGGAAGTATCGGACAACTTCTAGTCTCCTTCGCAAGTATCTTGGAGATTTTCTAATCGCTTCGTATTTAGATGTTGTTGAAGAGTCTGGTTATGACGAGAGACATGTAAAAGAGATTGAGAGAGCTGTTCTTTTGAAAAGTCTTGACTGTTTCTGGAGAGATCATCTTGTAAACATGAACAGACTCAGCTCTGCGGTGAATGTTAGGAGCTTTGGCCACAGAAATCCTCTAGAAGAATACAAAATTGATGGTTGTCGGTTTTTCATCTCAATGCTCAGTGCAACTCGCAGGTTAACCGTAGAAGCACTCTTACGACATTGGACATCTCCAATGGAATCCCAAGAATTATTTTTATAA 5430 0.43 MEELPECPVCLQNYDDENAIPRVLSCGHTICEACLVELPPRFPNTIRCPACTQLVKYSPKQGPSSLPKNIDLLRICLQDSSSKNQSPKSNQRPSINDGLAYSSIFWSDEFYVDWKDWILPHDAVSINEDGFGRFSSNSKGRVCFGVNRTVSLAPIVTFSPVSDSKFKFSYVAWVIKCLEGMNEVVREGLGLILEASVRQSRVCRVYGLWSEVVGGTLYSVCEKQCGRVLDKFGGLKDGFLGLELDKGGVCSFAMIAKGVIEAVIALNLEGLVAGCFGLSCFGFDELGGVCIDLNEVLVMGRKIMDAVSAGAGDEREAMCADCLDLVNELFVSPEVLSKLFNKGVISSESGNLRYPIGYGSDVWSLACVLLRLLIGNALPRITFEMSGEDGLDVSASYISWVEKVSSVLEEKIGSEYISLKQTLCKCLEINPESRPDVVDVRKCLQDVFVKHQFGFLGDSEVTVNRNNTGHLVILAKLCQLLEESSKEPREHELHAKEDGGQPDILQGAENISDEDFTSSLSQGMIELKDLQGHLGCITGLAVGGGYLFSSSFDKTVRVWSLQDFSHLHTFRGHENKVMALVYVDDEEPLCISGDGGGGIFVWGIDAPLRQDPLRKWYEQKDWRFSGIHSLTAFGNLLYTGSGDRTIKAWSLKDGTLMCTMDGHKSVVSTLSVCDKVLYSGSWDGTVRLWSLDDHSPLAVLGEDLPGEMKSILAITANRGLLVAAYENGCIKVWRNDALMSSKTLHNGAIFAMSMQGKWLYTGGWDKNVNIQELSGDELELTVNAFGSIPSSSVVTAILCSQGKLYVGYGDKSIKENIGRIHKTFTDFTSLNHWVVDDYFRLVNSVNAFEPRIQALSDEQLAAKTEEFRLRLKRGETLADIQAEAFAVVREAARRKLGMRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTAEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQKGMNSEERRFNYRCDITYTNNSELGFDYLRDNLAGNSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASQDAARYPVAAKVAELLTHDIHYKVELKNNSVELTEEGITLAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRDGKALIINELTGRVEEKRRWSEGIHQAVEAKECLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQTPVIEVPTNLPNIRKDLPIQAFATARGKWEQVRREVEDMFRQGRPVLVGTTSVENSELLAGLLREWNIPHNVLNARPKYAAREAEVVAQAGRKHAITISTNMAGRGTDIILGGNPKMLARGIIEDSIVPFLTREDPTSELAGEAISEKMLPKIKVGSSSLALLAKTALMAKYVLKSEGKSWTYQKAISFIVESIEMSLSYSLKELEKLANEESEIYPLGPTVALAYLSVLKDCEEHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFNFDNEWAIRLISKITNDESLPIEGGAIVKQLLALQINVEKFFFGIRKNLVEFDEVLEVQRKHVYDLRQLILTGDDDSCSQHILQYMQAVVDEIVFSNIDPLKHPRSWGLNNLLKEFKAIGGKLLHESFGGINDDTLLDSLRKLNEVNSVDVVNFCLPNLPAPPNAFRGIRRKSSSLRRWLAICTDDLIENGKYRTTSSLLRKYLGDFLIASYLDVVEESGYDERHVKEIERAVLLKSLDCFWRDHLVNMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVEALLRHWTSPMESQELFL* 1810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1937 1809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1218 1505 IPR027417 -
Mal2g1937 1809 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 660 692 - -
Mal2g1937 1809 SUPERFAMILY WD40 repeat-like 526 806 IPR036322 GO:0005515
Mal2g1937 1809 Gene3D Helical scaffold and wing domains of SecA 1672 1798 - -
Mal2g1937 1809 Gene3D Helical scaffold and wing domains of SecA 1527 1646 - -
Mal2g1937 1809 ProSiteProfiles SecA family profile. 820 1524 IPR014018 -
Mal2g1937 1809 PANTHER SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 815 1808 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mal2g1937 1809 Gene3D - 1049 1169 - -
Mal2g1937 1809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 827 1216 IPR027417 -
Mal2g1937 1809 SMART ring_2 7 51 IPR001841 -
Mal2g1937 1809 Pfam SecA Wing and Scaffold domain 1522 1796 IPR011116 GO:0016020|GO:0017038
Mal2g1937 1809 Gene3D - 612 832 IPR015943 GO:0005515
Mal2g1937 1809 Pfam SecA preprotein cross-linking domain 1055 1159 IPR011130 GO:0016020|GO:0017038
Mal2g1937 1809 Pfam RING-type zinc-finger 7 49 IPR027370 -
Mal2g1937 1809 SMART WD40_4 735 772 IPR001680 GO:0005515
Mal2g1937 1809 SMART WD40_4 609 650 IPR001680 GO:0005515
Mal2g1937 1809 SMART WD40_4 523 560 IPR001680 GO:0005515
Mal2g1937 1809 SMART WD40_4 653 690 IPR001680 GO:0005515
Mal2g1937 1809 SMART WD40_4 693 734 IPR001680 GO:0005515
Mal2g1937 1809 SMART WD40_4 563 603 IPR001680 GO:0005515
Mal2g1937 1809 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 88 IPR013083 -
Mal2g1937 1809 SMART SecA_PP_bind_2 1048 1159 IPR011130 GO:0016020|GO:0017038
Mal2g1937 1809 CDD DEXDc_SecA 859 1215 - -
Mal2g1937 1809 Gene3D - 840 1216 IPR027417 -
Mal2g1937 1809 SMART SecA_DEAD_2 824 1203 IPR011115 GO:0005524|GO:0016020|GO:0017038
Mal2g1937 1809 SMART serkin_6 134 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1937 1809 PRINTS G protein beta WD-40 repeat signature 547 561 IPR020472 -
Mal2g1937 1809 PRINTS G protein beta WD-40 repeat signature 637 651 IPR020472 -
Mal2g1937 1809 PRINTS G protein beta WD-40 repeat signature 677 691 IPR020472 -
Mal2g1937 1809 ProSitePatterns SecA family signature. 1303 1318 IPR020937 GO:0006605|GO:0006886|GO:0016020
Mal2g1937 1809 Gene3D - 1218 1524 IPR027417 -
Mal2g1937 1809 CDD RING-HC_TRIM32_C-VII 6 52 - -
Mal2g1937 1809 Hamap Protein translocase subunit SecA [secA]. 819 1800 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mal2g1937 1809 Gene3D Transferase(Phosphotransferase) domain 1 308 455 - -
Mal2g1937 1809 PRINTS SecA protein signature 1177 1194 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mal2g1937 1809 PRINTS SecA protein signature 934 944 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mal2g1937 1809 PRINTS SecA protein signature 987 1007 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mal2g1937 1809 PRINTS SecA protein signature 918 932 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mal2g1937 1809 PRINTS SecA protein signature 1214 1227 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mal2g1937 1809 PRINTS SecA protein signature 1140 1162 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mal2g1937 1809 PRINTS SecA protein signature 880 904 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mal2g1937 1809 PANTHER PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC 815 1808 - -
Mal2g1937 1809 TIGRFAM secA: preprotein translocase, SecA subunit 845 1618 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mal2g1937 1809 Pfam WD domain, G-beta repeat 527 560 IPR001680 GO:0005515
Mal2g1937 1809 Pfam WD domain, G-beta repeat 656 690 IPR001680 GO:0005515
Mal2g1937 1809 Pfam SecA DEAD-like domain 831 1202 IPR011115 GO:0005524|GO:0016020|GO:0017038
Mal2g1937 1809 ProSiteProfiles Trp-Asp (WD) repeats profile. 660 699 IPR001680 GO:0005515
Mal2g1937 1809 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 906 1069 IPR014001 -
Mal2g1937 1809 SUPERFAMILY RING/U-box 4 59 - -
Mal2g1937 1809 CDD SF2_C_secA 1221 1492 IPR044722 -
Mal2g1937 1809 ProSiteProfiles Trp-Asp (WD) repeats profile. 530 569 IPR001680 GO:0005515
Mal2g1937 1809 SUPERFAMILY Protein kinase-like (PK-like) 323 452 IPR011009 -
Mal2g1937 1809 Gene3D - 503 611 IPR015943 GO:0005515
Mal2g1937 1809 SUPERFAMILY Pre-protein crosslinking domain of SecA 1047 1168 IPR036670 GO:0016020|GO:0017038
Mal2g1937 1809 ProSitePatterns Zinc finger RING-type signature. 26 35 IPR017907 -
Mal2g1937 1809 ProSiteProfiles Zinc finger RING-type profile. 7 52 IPR001841 -
Mal2g1937 1809 SUPERFAMILY Helical scaffold and wing domains of SecA 1528 1797 IPR036266 -
Mal2g1937 1809 ProSiteProfiles Trp-Asp (WD) repeats profile. 634 659 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1937 Mal-Chr2 23437669 23467296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1937 545 762 Acyl Lipid Metabolism Gene Families AT3G18860 28.959 9.15e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1937 K03070 - gmx:100793437 2910.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1937 2 23437669 23467296 Mal2g1937 2 23437669 23467296 ECH