Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1923 ATGTTGTTTGTGAATATGTCTGTTCTATCTAGCACTGATTTGCTTCGTATTTTTGAGAAGCTAGACACAAATAGCGACGGTTTTGTGAGTCTTGAGGAGTTAAACTCTGTGCTCCAAAGGATATGTAATAATAGTTCACAATTTAGCTTAGAAGAACTTGAATCTCTTGTAGAAAAGAAGAGCTTAGACTTCAATGAATTCTTATTCTTTTACAACTCAATATTAAAGCAGAACAATATTGAAGAGAACAAAGGAGGCGATGATGATGATGATGAGTTAGAGATGGATCTTGTGAAGACTTTCAAAGTGTTTGATTTGGATGGAGATGGATTTATTACAAGCCAAGAACTTGAGTGTGTGTTGAAGAGACTTGGTTTCTTGGATGAAACTAGTGGTAAGGATTGTAGAAGTATGATTCGATTTTATGATACCAATTTGGATGGTAGGCTTGATTTTCAGGAATTCAAGAACATGATGTTGCTTACAAGTGTATGA 495 0.3475 MLFVNMSVLSSTDLLRIFEKLDTNSDGFVSLEELNSVLQRICNNSSQFSLEELESLVEKKSLDFNEFLFFYNSILKQNNIEENKGGDDDDDELEMDLVKTFKVFDLDGDGFITSQELECVLKRLGFLDETSGKDCRSMIRFYDTNLDGRLDFQEFKNMMLLTSV* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1923 164 ProSiteProfiles EF-hand calcium-binding domain profile. 130 164 IPR002048 GO:0005509
Mal2g1923 164 ProSitePatterns EF-hand calcium-binding domain. 105 117 IPR018247 -
Mal2g1923 164 Pfam EF hand 17 37 IPR002048 GO:0005509
Mal2g1923 164 SMART efh_1 96 124 IPR002048 GO:0005509
Mal2g1923 164 SMART efh_1 13 41 IPR002048 GO:0005509
Mal2g1923 164 SMART efh_1 134 162 IPR002048 GO:0005509
Mal2g1923 164 PANTHER CALCIUM-BINDING PROTEIN CML44-RELATED 6 162 - -
Mal2g1923 164 ProSiteProfiles EF-hand calcium-binding domain profile. 9 44 IPR002048 GO:0005509
Mal2g1923 164 CDD EFh 99 159 IPR002048 GO:0005509
Mal2g1923 164 Gene3D - 1 71 - -
Mal2g1923 164 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 6 162 - -
Mal2g1923 164 Pfam EF-hand domain pair 97 159 IPR002048 GO:0005509
Mal2g1923 164 ProSitePatterns EF-hand calcium-binding domain. 22 34 IPR018247 -
Mal2g1923 164 SUPERFAMILY EF-hand 13 160 IPR011992 -
Mal2g1923 164 ProSiteProfiles EF-hand calcium-binding domain profile. 92 127 IPR002048 GO:0005509
Mal2g1923 164 Gene3D - 79 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1923 Mal-Chr2 23240424 23240918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1923 7 160 EF-hand Containing Proteins AT1G21550 43.871 1.87e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1923 K13448 - gmx:100527117 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1923 2 23240424 23240918 Mal2g1923 2 23240424 23240918 ECH