Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1920 ATGGCATACTTAGAGGAAATAAGAGAGGCCCAAAGAGCCCATGGCCCAGCCACCATACTTGCTATTGGTACCGCAACTCCATCCAATTGCATTTACCAATCTGATTTTACCGATTATTACTTCCGAGTTACCAAGAGTGACCACATGACTCAACTCAAGGCCAAATTGAAGCGTATATGCGAGAAGTCAATGATAAAGAAACGTTACATACATCTAACCGAAGAAATCCTGAAAGAACACCCTAATATATCCACTTACGATGAACCATCCCTCGATGTACGCCAAGACATATTAGTTGAAGAAGTGCCAAAGCTAGGTGAAAAAGCAGCATTAAAAGCCATAAAAGAATGGGGAAGACCAAAATCAGAGATAACTCATCTCATATTTTGTTCAACTTCTGGTGTTGATATGCCGGGTGCTGATTATCAACTCATCAAACTCTTAAATCTAAATCCATCCACAAAAAGGTTCATGTTATACCACCAAGGTTGTTATGCTGGTGGAACCGTTCTTCGTCTTGCCAAAGATCTTGCTGAGAATAACATTGGTGCACGTGTCCTTGTTGTGTGTTCTGAAATAACTGTTGTTACTTTTCGTGGGCCCAATGAATCACACTTAGATTCGTTAGTTGGACAAGCACTCTTTGGTGACGGTGCTTCATCTGTGATCGTTGGATCAAACCCTGATACAACAATCGAACGACCATTATTTCATCTTGTTTCTGCTTTAGAAACTATTTTACCAAACTCTGAAGGTGCAATTGAAGGACACTTGCGTGAGGTGGGACTCACTTTTCATTTGAAAGATAATGTTCCAAATTTGATTGGTGAGAATATTGAGAAGAGTTTGGAAGAAACTTTTCACCCATTGGGAATTAGTGATTGGAATTCTTTATTTTGGGTAACACACCCTGGTGGTCCTGCAATATTGAAGAGGATTGAAGAAACGGTTGGGTTGAATTCAGATAAACTAAATGCAACTAAACATGTTTTGAGTGAGTATGGAAACATGTCGAGTGCATGTGTGATATTTATATTGGATGAGATGAGAAGAAGGTCTATCGAGGAAGGGAAAACAACAACTGGTGAAGGACTTAAATGGGGTGTTTTGTTTGGATTTGGTCCTGGCTTGACCATGGAAACCATTGCTTTGCATAGTGCCAACATAGAACATGGTTACTAG 1182 0.3993 MAYLEEIREAQRAHGPATILAIGTATPSNCIYQSDFTDYYFRVTKSDHMTQLKAKLKRICEKSMIKKRYIHLTEEILKEHPNISTYDEPSLDVRQDILVEEVPKLGEKAALKAIKEWGRPKSEITHLIFCSTSGVDMPGADYQLIKLLNLNPSTKRFMLYHQGCYAGGTVLRLAKDLAENNIGARVLVVCSEITVVTFRGPNESHLDSLVGQALFGDGASSVIVGSNPDTTIERPLFHLVSALETILPNSEGAIEGHLREVGLTFHLKDNVPNLIGENIEKSLEETFHPLGISDWNSLFWVTHPGGPAILKRIEETVGLNSDKLNATKHVLSEYGNMSSACVIFILDEMRRRSIEEGKTTTGEGLKWGVLFGFGPGLTMETIALHSANIEHGY* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1920 393 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Mal2g1920 393 Gene3D - 236 392 IPR016039 GO:0016746
Mal2g1920 393 Gene3D - 1 235 IPR016039 GO:0016746
Mal2g1920 393 PIRSF PKS_III 2 389 IPR011141 GO:0009058|GO:0016747
Mal2g1920 393 Pfam Chalcone and stilbene synthases, C-terminal domain 239 386 IPR012328 -
Mal2g1920 393 SUPERFAMILY Thiolase-like 235 386 IPR016039 GO:0016746
Mal2g1920 393 SUPERFAMILY Thiolase-like 1 232 IPR016039 GO:0016746
Mal2g1920 393 CDD CHS_like 16 384 - -
Mal2g1920 393 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
Mal2g1920 393 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 4 389 IPR011141 GO:0009058|GO:0016747
Mal2g1920 393 PANTHER CHALCONE SYNTHASE 8 4 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1920 Mal-Chr2 23206980 23209470 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1920 K00660 - nnu:104591893 621.698