Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1892 ATGACTATGGAGTTGCATAGCGTGTGCCGCACGCTACGGGAAGCGAGACAACTACACCTGTCGCTCCTGAAAACCGGTACTCTTCATTCATCCGTCATCACCACCAACCGCCTCCTTCAGCAATACTCCCGCCGTGGCTCTCTCCAAGATGCATCCAAACTGTTCGATGAAATGCCGCAACCAAATCCTTTCTCGTGGAACACCCTCATTGAAGCTCATATCAACTCAGGCAACAGAAATAAGTCACTGCAATTGTTCCACGCTATGCCCCACAAAAGCCATTATTCGTGGAACCTCATTGTTTCAACGTTTTCCAAATCTGGTGACCTTCAACAAGCTCATAGTCTCTTCAATGCCATGCCTATAAAGAATCCCCTTGTTTGGAATTCGATGATTCACGGGTATTCTCGACATGGGTACCCCAGGAAAGCGATTTTACTATTTAAGGAGATGAATTTGGACCCTTTAGAGACGATGCACCGCGATGCGTTTGTGTTGTCAACTGTTTTTGGTGCATGTGCTGACTTGTATGCTCTTGATTGTGGGAAACAAGTTCATGCGCGTGTTTTTATTGATGGTTTTGAATTTGAACATGACAAGGTTTTGTGCAGTTCGATTGTTAATTTTTATGGGAAATGTGGTGATTTGGATAGTGCTGCTCGGGTTGTGGGTTTTGTGAAGGAAGTTGATGACTTTTCTTTATCTGCTTTGGTATCGGGTTATGCAAATGCAAGTAGAATGAGTGATGCAAGAAGGGTTTTTGATAACAAGGTTCATCCTTGTGCTGTGTTGTGGAATTCAATTATTTCGGGTTATGTGTCCAATGGTGAGGAAATGGAAGCATTGGATCTCTTCATCAAAATGCGTAGGAATGGGGTTTGGGGAGACTTCTCTGCTGTTGCAAATATTTTGAGTGCTGCTAGTAGCTTGCTCAATGTTGAACTTGTGAAACAAATGCATGATCACGCTTTTAAAATTGGGGCGACTTGTGATATCGTGGTTGCTAGTGCTCTGCTTGATGCATACTCCAAATGTCAACACCCTCACGAAGCTTGCAAGTTGTTTGGTGAGCTCAGAGCCTATGATGCAATATTGCTTAATACTATGATTACTGTGTATTGTAACTGTGGAAGAATTGAAGATGCAAAATGGATTTTTAACACGATGCCTAACAAAACCTTGATTTCATGGAATTCAATCTTGGTTGGCCTCACTCAGAATGCGTGTCCAAGTGAGGCGTTGGATACTTTCTCTAGGATGAATAAGCTGGACGTGAAAATGGACAAGTTTAGCTTTGCCAGTGTTATAAGTGCTTGTGCTATTAAATCATCCCTTGAACTCGGTGAGCAGGTATTTGGTAAAGCTATTACTTTGGGGCTTGAATCTGACCAAATCATTTCTACCTCACTTGTTGATTTTTATTGTAAATGTGGTCTTGTTGAGATGGGACTAAAAGTTTTTGATGGAATGATAAAAACTGATGAAGTTTCATGGAATACAATGCTGATGGGATATGCGACAAATGGATATGGAATAGAGGCACTAACCCTTTTTAATGAAATGAGGTATAGTGGTGTGAGGCCTTCTGCTATCACTTTTACTGGGGTTCTTTCAGCCTGTGATCACTGTGGTCTGGTAGAAGAAGGAAGAAATCTGTTCCGTACTATGAAGCATGAGTATGATATAAATCCAGGGATTGAACATTACTCTTGCATGGTTGACCTTTTTACCAGAGCTGGTTGTTTTGGGGAAGCAATGTATCTTATTGAAGAGATGCCTTTTCAGGCTGATGCAAGTATGTGGTTATCAGTATTAAGAGGCTGTGTATCCCATGGAAATAAAACTATTGGATTGATGGCCGCAGATAAAATTATTCAGCTTGATCCTGAAAATTCAGGTGCTTATATACAATTATCTAACATACTTGCAACTTCTGAGGACTGGGAAGGATCAGCACAAGTAAGAGAGTTGATGAGAAATAAGAATGTTCAGAAGATTCCTGGTTGCAGTTGGATGGATTGCTAA 2025 0.4128 MTMELHSVCRTLREARQLHLSLLKTGTLHSSVITTNRLLQQYSRRGSLQDASKLFDEMPQPNPFSWNTLIEAHINSGNRNKSLQLFHAMPHKSHYSWNLIVSTFSKSGDLQQAHSLFNAMPIKNPLVWNSMIHGYSRHGYPRKAILLFKEMNLDPLETMHRDAFVLSTVFGACADLYALDCGKQVHARVFIDGFEFEHDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANASRMSDARRVFDNKVHPCAVLWNSIISGYVSNGEEMEALDLFIKMRRNGVWGDFSAVANILSAASSLLNVELVKQMHDHAFKIGATCDIVVASALLDAYSKCQHPHEACKLFGELRAYDAILLNTMITVYCNCGRIEDAKWIFNTMPNKTLISWNSILVGLTQNACPSEALDTFSRMNKLDVKMDKFSFASVISACAIKSSLELGEQVFGKAITLGLESDQIISTSLVDFYCKCGLVEMGLKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMRYSGVRPSAITFTGVLSACDHCGLVEEGRNLFRTMKHEYDINPGIEHYSCMVDLFTRAGCFGEAMYLIEEMPFQADASMWLSVLRGCVSHGNKTIGLMAADKIIQLDPENSGAYIQLSNILATSEDWEGSAQVRELMRNKNVQKIPGCSWMDC* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1892 674 Pfam E motif 611 672 IPR046848 -
Mal2g1892 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 124 158 IPR002885 -
Mal2g1892 674 Gene3D Tetratricopeptide repeat domain 155 296 IPR011990 GO:0005515
Mal2g1892 674 PANTHER OS03G0849700 PROTEIN 161 674 - -
Mal2g1892 674 Gene3D Tetratricopeptide repeat domain 540 665 IPR011990 GO:0005515
Mal2g1892 674 Gene3D Tetratricopeptide repeat domain 445 539 IPR011990 GO:0005515
Mal2g1892 674 Gene3D Tetratricopeptide repeat domain 300 444 IPR011990 GO:0005515
Mal2g1892 674 PANTHER OS07G0578800 PROTEIN-RELATED 161 674 IPR045215 GO:0003723|GO:0009451
Mal2g1892 674 SUPERFAMILY TPR-like 356 654 IPR011990 GO:0005515
Mal2g1892 674 PANTHER OS07G0578800 PROTEIN-RELATED 103 150 IPR045215 GO:0003723|GO:0009451
Mal2g1892 674 PANTHER OS07G0578800 PROTEIN-RELATED 10 92 IPR045215 GO:0003723|GO:0009451
Mal2g1892 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Mal2g1892 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 494 528 IPR002885 -
Mal2g1892 674 Gene3D Tetratricopeptide repeat domain 1 151 IPR011990 GO:0005515
Mal2g1892 674 TIGRFAM PPR: pentatricopeptide repeat domain 569 592 IPR002885 -
Mal2g1892 674 TIGRFAM PPR: pentatricopeptide repeat domain 127 151 IPR002885 -
Mal2g1892 674 TIGRFAM PPR: pentatricopeptide repeat domain 496 529 IPR002885 -
Mal2g1892 674 TIGRFAM PPR: pentatricopeptide repeat domain 263 293 IPR002885 -
Mal2g1892 674 TIGRFAM PPR: pentatricopeptide repeat domain 468 493 IPR002885 -
Mal2g1892 674 Pfam PPR repeat family 494 540 IPR002885 -
Mal2g1892 674 PANTHER OS03G0849700 PROTEIN 103 150 - -
Mal2g1892 674 PANTHER OS03G0849700 PROTEIN 10 92 - -
Mal2g1892 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 261 295 IPR002885 -
Mal2g1892 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 62 96 IPR002885 -
Mal2g1892 674 Pfam PPR repeat 336 359 IPR002885 -
Mal2g1892 674 Pfam PPR repeat 95 121 IPR002885 -
Mal2g1892 674 Pfam PPR repeat 367 391 IPR002885 -
Mal2g1892 674 Pfam PPR repeat 263 293 IPR002885 -
Mal2g1892 674 Pfam PPR repeat 127 151 IPR002885 -
Mal2g1892 674 Pfam PPR repeat 64 91 IPR002885 -
Mal2g1892 674 Pfam PPR repeat 568 592 IPR002885 -
Mal2g1892 674 Pfam PPR repeat 468 492 IPR002885 -
Mal2g1892 674 Pfam PPR repeat 395 423 IPR002885 -
Mal2g1892 674 Pfam PPR repeat 34 59 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1892 Mal-Chr2 22838526 22840550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1892 32 673 Glycoside Hydrolase AT3G49170 31.346 1.35e-101 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1892 - - gmx:100790756 1067.76