Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1891 ATGTACCCATTTTTCAAGCAAACTCAGTGTCTTCACTCTTCACTTTCTCATTGTTCTACTCTCTTAGACCACTGTTTATCTCATCAATCTTCTAACTTTCTCAAAATCGTCCATGCCCACTTCCTCAAATTGGGTCTTAATTCCTATACTTATTTGGGTAATCGTTGTATCGATCTTTATACTGAATTCGGCTACATTAATGATGCATTGAAGGTGTTTGATGATATTTCTCACAAGAACTCAACATCCTGGAACATTTGCTTAAAAGGGTTGTTTAAAAGTGGACAACTTGGTAAGGCATGTTACATGTTTGATGAAATGCCTGTTAGAGATGTTGTTAGTTGGAACACCATGATTTCGGGGTGTGCTTCTTGTGGGTTTTCTGGTCATGCCTTGGGGGTTTTTGTTGAAATGCAAGGTGCTGGTGTGAGACCAAGTGGGTTCACTTTTTCGATTTTGACGTCGCTTGTGTCGAGTCCTTGTCATGCTAAGGAGGTTCATGGTAGGATGATTAGAAGTGAGATGGATTTGTCTAATGTGGTGATGGGAAATTCGTTGATAACTATGTATGGGAAGTTTGGTCTAGTTGATTATTGTTTTGGTGTGATTTTTAGTATGAAGCAGCTTGATGTTATATCATGGAACTCTCTGATATGGGCGTGTCATAGAGCTGGGCAACAAGAGATTGCTTTAGAGAAGTTCAGTGATATGAGAGCTGCGGAGTTGCTGCCTGACCAGTTTACGTGTTCAATATTGATGAGTGTCTGTTCTAATTTGCGAGATTTGGAAAAGGGTAAGCAAGTTTTTGCCTTTTGTTTGAAGGTGGGATTTGTTTATAATAGCATTGTATCAGGTGCTGCTATTGACCTCTTTTCCAAATGCAACAGATTGGAGGATGCTGTGCGGCTCTTTAAAGAACAAGAACAATGGGATTCCGCTCTGTGCAATTCCATGATTTCTTGTTATGCTAGACATGATTTGGGGGAAGATGCTCTGCAGCTCTTTGTGCTGACCTTGAGGGAGAGTATCAGACCAACAGAATACACGGTTAGTTGTCTTATCAGTTCTGTTTCCATTTTCTTGCCAGTAGAAGTGGGTAATCAAATCCATGCTTTGGTTACTAAATTGGGTTTCGAGTCAGACGCAGTTGTTGCCGGTTCACTTGTTGATATGTATGCTAAATTTGGATTTATTGATGATGCCTTGAGTATCTTCAACGGAATACAAACAAAAGATTTAGTATCATGGAACACTATAATGACGGGACTGTCTTGCAATGGCAAAGTGTTTGTGACCATGGACCTCTTCAAGGAATTGATAAGAGAAGGAATGACACCTGATCGAATAACGTTTGCTGCAGTTCTACTAGCATGCAACTATGGGAACTTGGTTGATGAGGGGATTAAAATATTTTCCCAAATGGAGATGGAATTTGGAGTAAAATCAGAGGAAGACCATTATTCATATGTTGTGGAGATGTTATGTAGAGCTGGTAAACTCAAAGAAGCCATTGACATTGTGGAAAAAATGCCATATAAAATTTCCCCCGACATTTGGATGTCTATTCTTTCTGCTTGTGCAATGTATGGAGACTTGCAAACTATTGAAATAGCCGCGACTAAAATAATAGAGAGGGCACCACAGACATCCTTACCTTACTTGGTGTTGGCCCGGATATATCAGATGAGTGGCCGATGGGAGAGTGCGGTTCGAGTGAGGAAGGCTATGGAAAATAGAGGTGGTAAAGAGTTAACTGGATGCAGTTGGGTGGGAATAAAAAACCATGTATATACTTTTGAATCAAATCAATTACAGCATTATGGTGGCAAAGATATTTATCTGCTACTGAATTTGCTGGTCTGGGAGATGGAGACTGAATGTTGTGTCTAA 1890 0.4 MYPFFKQTQCLHSSLSHCSTLLDHCLSHQSSNFLKIVHAHFLKLGLNSYTYLGNRCIDLYTEFGYINDALKVFDDISHKNSTSWNICLKGLFKSGQLGKACYMFDEMPVRDVVSWNTMISGCASCGFSGHALGVFVEMQGAGVRPSGFTFSILTSLVSSPCHAKEVHGRMIRSEMDLSNVVMGNSLITMYGKFGLVDYCFGVIFSMKQLDVISWNSLIWACHRAGQQEIALEKFSDMRAAELLPDQFTCSILMSVCSNLRDLEKGKQVFAFCLKVGFVYNSIVSGAAIDLFSKCNRLEDAVRLFKEQEQWDSALCNSMISCYARHDLGEDALQLFVLTLRESIRPTEYTVSCLISSVSIFLPVEVGNQIHALVTKLGFESDAVVAGSLVDMYAKFGFIDDALSIFNGIQTKDLVSWNTIMTGLSCNGKVFVTMDLFKELIREGMTPDRITFAAVLLACNYGNLVDEGIKIFSQMEMEFGVKSEEDHYSYVVEMLCRAGKLKEAIDIVEKMPYKISPDIWMSILSACAMYGDLQTIEIAATKIIERAPQTSLPYLVLARIYQMSGRWESAVRVRKAMENRGGKELTGCSWVGIKNHVYTFESNQLQHYGGKDIYLLLNLLVWEMETECCV* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1891 629 SUPERFAMILY TPR-like 55 571 IPR011990 GO:0005515
Mal2g1891 629 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 311 345 IPR002885 -
Mal2g1891 629 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 111 145 IPR002885 -
Mal2g1891 629 Gene3D Tetratricopeptide repeat domain 163 269 IPR011990 GO:0005515
Mal2g1891 629 Gene3D Tetratricopeptide repeat domain 270 359 IPR011990 GO:0005515
Mal2g1891 629 Gene3D Tetratricopeptide repeat domain 462 611 IPR011990 GO:0005515
Mal2g1891 629 Pfam E motif 529 590 IPR046848 -
Mal2g1891 629 Gene3D Tetratricopeptide repeat domain 17 162 IPR011990 GO:0005515
Mal2g1891 629 Gene3D Tetratricopeptide repeat domain 365 461 IPR011990 GO:0005515
Mal2g1891 629 PANTHER OS03G0435200 PROTEIN 1 629 - -
Mal2g1891 629 Pfam PPR repeat 288 306 IPR002885 -
Mal2g1891 629 Pfam PPR repeat 414 443 IPR002885 -
Mal2g1891 629 Pfam PPR repeat 386 411 IPR002885 -
Mal2g1891 629 Pfam PPR repeat 487 511 IPR002885 -
Mal2g1891 629 Pfam PPR repeat 315 335 IPR002885 -
Mal2g1891 629 PANTHER OS07G0578800 PROTEIN-RELATED 1 629 IPR045215 GO:0003723|GO:0009451
Mal2g1891 629 TIGRFAM PPR: pentatricopeptide repeat domain 414 447 IPR002885 -
Mal2g1891 629 TIGRFAM PPR: pentatricopeptide repeat domain 83 112 IPR002885 -
Mal2g1891 629 TIGRFAM PPR: pentatricopeptide repeat domain 113 146 IPR002885 -
Mal2g1891 629 TIGRFAM PPR: pentatricopeptide repeat domain 315 346 IPR002885 -
Mal2g1891 629 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 412 446 IPR002885 -
Mal2g1891 629 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 210 244 IPR002885 -
Mal2g1891 629 Pfam PPR repeat family 210 256 IPR002885 -
Mal2g1891 629 Pfam PPR repeat family 110 153 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1891 Mal-Chr2 22832087 22833976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1891 100 624 Glycoside Hydrolase AT3G49170 31.157 1.05e-84 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1891 - - gmx:100819993 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1891 2 22832087 22833976 Mal2g1891 2 22832087 22833976 ECH