Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1890 ATGGCCGCATGGTTATTAGGAAGGTCCAGGACCTTAGTTCATAATCACCAAAACCTTCAAAATAAGCTGTCCTTGTTGTTAGGATCAGGATCAACATTTATTAACCACCGTTTTGAGTCATTTGTTGCATCACCAGCTAGTACCATTTCTTATTTCTTGCGTTATGAATCCACCAAATCCCAGGCACAATTGGATTTGCAGCACCATGTTAGCCACGATGACCATGATGATCAGTTCATTGATTTTCCTGGAGGGAAAGTTGCATTCACTTCTGAAATGAGATTCATTTCTGATACTTCTCACAAAAGGGTTCCTTGCTATCGAGTTCTTGATAACGATGGTGAGCTCATGGAACACACCAATCATGTTCAGGTTAGCAAAGAAATGGCTGTGAGGATGTATTCTGAGATGGTCACTCTTCAAACTATGGACAGCATATTCTATGAGTTGCAGAGGCAAGGAAGAATTTCTTTCTATCTCACCACAATGGGAGAAGAAGCAGTTAACATTGCATCAGCAGCCGCTCTTTCTTCCGATGATATTATCTTACCTCAGTACCGGGAGCCTGGAGTTCTGTTATGGCGCGGTTTCAGTCTACAACAATTTGCTCATCAATGCTTTGGAAACACAAATGATTTTGGTAAAGGAAGGCAAATGCCTATACACTACGGCTCTAACAACCACAATTACTTCACAGTCTCATCCCCTATTGCAACACAACTTCCTCAAGCTGTAGGCGCTGCTTATTCTCTTAAAATGGACGGCAAAAGTGCTTGTGCAGTAACTTTTTGTGGGGATGGAAGTACTAGTGAGGGAGATTTTCATGCTGGTATGAATTTTGCAGCAGTAATGGAGGCTCCAGTTATTTTTATCTGTCGTAACAATGGATGGGCCATCAGTACCCCTGTCGAAGAACAATTTCGAAGTGATGGTATTGTGGTGAAAGGTCAAGCTTATGGAATGTGGAGTATCAGAGTAGATGGAAATGATGCACTTGCTGTTTATAGTGCAGTTCATACTGCTCGCGAAATTGCTATAAAAGAACAAAGACCAGTCTTAATTGAGGCTCTCAGTTATAGAGTAGGACACCACTCTACATCCGATGATTCAACTAAGTACAGACCAATTGATGAGATTGAATATTGGAAGATGGAAAGAAATCCTGTGAATAGATTCAAAAAATGGGTTGAAAGGAATGGTTGGTGGAGTGACAAGGAAGAATTGGAGCTTAGAAGCAGTGTAAGGAAGCAGTTAATGCATGCAATTCAAGTGGCAGAGAAAGCACAAAAACCTCCACTTGAGGACATGTTTACTGATGTCTATGACAAACTTTCATCAAACCTTGAGGAGCAAGAAAGAGAACTTAGAAAAACCATTGACAAACATCCCAAAGATTACCCTTCTGATGTTCCTTTGTAG 1419 0.4094 MAAWLLGRSRTLVHNHQNLQNKLSLLLGSGSTFINHRFESFVASPASTISYFLRYESTKSQAQLDLQHHVSHDDHDDQFIDFPGGKVAFTSEMRFISDTSHKRVPCYRVLDNDGELMEHTNHVQVSKEMAVRMYSEMVTLQTMDSIFYELQRQGRISFYLTTMGEEAVNIASAAALSSDDIILPQYREPGVLLWRGFSLQQFAHQCFGNTNDFGKGRQMPIHYGSNNHNYFTVSSPIATQLPQAVGAAYSLKMDGKSACAVTFCGDGSTSEGDFHAGMNFAAVMEAPVIFICRNNGWAISTPVEEQFRSDGIVVKGQAYGMWSIRVDGNDALAVYSAVHTAREIAIKEQRPVLIEALSYRVGHHSTSDDSTKYRPIDEIEYWKMERNPVNRFKKWVERNGWWSDKEELELRSSVRKQLMHAIQVAEKAQKPPLEDMFTDVYDKLSSNLEEQERELRKTIDKHPKDYPSDVPL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1890 472 Coils Coil 441 461 - -
Mal2g1890 472 CDD TPP_E1_PDC_ADC_BCADC 133 425 - -
Mal2g1890 472 Gene3D - 75 470 - -
Mal2g1890 472 Pfam Dehydrogenase E1 component 136 432 IPR001017 GO:0016624
Mal2g1890 472 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 52 472 - -
Mal2g1890 472 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 103 467 IPR029061 -
Mal2g1890 472 MobiDBLite consensus disorder prediction 452 472 - -
Mal2g1890 472 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 52 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1890 Mal-Chr2 22825009 22830537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1890 1 309 Acyl Lipid Metabolism Gene Families AT1G21400 62.857 6.16e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1890 K00166 - gmx:100796766 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1890 2 22825009 22830537 Mal2g1890 2 22825009 22830537 ECH