Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1883 ATGGTTGGGAAGGATAATCTGAAGCCTGAGGATTTGAATTTGTGTTTTGAGAATCTTATGATGGTTGCTGGTGGTGGGTATGGAGGGAACATGAAGATTGGTGTGATCACTGAATGGAAGGATATTCCTGTTGAGCTTTTGATGCAGATTCTGTCTCTTGTGGATGATCAGACGGTGATTCGAGCTTCTGGTGTTTGCCGTGGTTGGAGAGATTCTATTTACTTTGGCCTTCCACGTTTATCACTCTCTTGGTGTAACAAGAACATGAACAACTTGGTCCTATCTCTTGTTCCCAAGTTTGCAAAATTGCAAACTCTAATCCTTCGTCAAGATAAGCCTCAACTAGATGATAATGCTGTTGGGACTATTGCAAACTTCTGTCATGACCTGCAGATTCTTGACCTCAGCAAAAGTTTCAAGCTCACTGATCGCTCATTGTATGCTATAGCTCATGGTTGTCGTGATCTTTCGAAACTAAACATCAGTGGATGTTCAGCATTTAGTGACAATGCTCTGGCCTACCTTGCTGGTTTCTGCAGAAAACTGAAAGTTCTAAATCTCTGTGGATGTGTTAGAGCAGCTTCTGATACTGCACTTCAGGCTATTGGACACTACTGCAATCAGTTACAGTCTTTGAACCTTGGATGGTGCGATAAAGTTGGTGATGTTGGAGTGATGAGTTTAGCATATGGTTGTCCTGATCTAAGGACAGTTGACTTGTGTGGGTGTGTTTATATAACAGATGATAGTGTGATTGCTTTGGCAAACAGATGCCCTCACCTGAGGTCTCTTGGACTGTACTTCTGCAAGAACATCACTGACAATGCAATGTATTCGTTGGCACAAAGCAAAGTGAAGAACAGGATGTGGGGATCTGTGAAAGGTGGAAATGATGAGGATGGTCTAAGGACTTTGAACATTAGCCAATGCACTGCACTCACTCCTTCAGCTGTTCAGGCGGTTTGTGACTCATCCCCTTCTCTCCACACATGCTCAGGGAGGCATTCACTCATCATGAGTGGCTGTCTCAATTTGACTGAAGTCCATTGTGCTTGTGCTGGTCATGCACACCGCGCAATCAACACTTTACCTTATCCTGCTCATTAA 1107 0.4354 MVGKDNLKPEDLNLCFENLMMVAGGGYGGNMKIGVITEWKDIPVELLMQILSLVDDQTVIRASGVCRGWRDSIYFGLPRLSLSWCNKNMNNLVLSLVPKFAKLQTLILRQDKPQLDDNAVGTIANFCHDLQILDLSKSFKLTDRSLYAIAHGCRDLSKLNISGCSAFSDNALAYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNLGWCDKVGDVGVMSLAYGCPDLRTVDLCGCVYITDDSVIALANRCPHLRSLGLYFCKNITDNAMYSLAQSKVKNRMWGSVKGGNDEDGLRTLNISQCTALTPSAVQAVCDSSPSLHTCSGRHSLIMSGCLNLTEVHCACAGHAHRAINTLPYPAH* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1883 368 SMART LRR_CC_2 153 178 IPR006553 -
Mal2g1883 368 SMART LRR_CC_2 206 231 IPR006553 -
Mal2g1883 368 SMART LRR_CC_2 258 283 IPR006553 -
Mal2g1883 368 SMART LRR_CC_2 127 152 IPR006553 -
Mal2g1883 368 SMART LRR_CC_2 179 205 IPR006553 -
Mal2g1883 368 SMART LRR_CC_2 232 257 IPR006553 -
Mal2g1883 368 SMART LRR_CC_2 299 324 IPR006553 -
Mal2g1883 368 Pfam Leucine Rich repeat 232 255 IPR001611 GO:0005515
Mal2g1883 368 Pfam Leucine Rich repeat 258 281 IPR001611 GO:0005515
Mal2g1883 368 Pfam Leucine Rich repeat 206 229 IPR001611 GO:0005515
Mal2g1883 368 Gene3D Ribonuclease Inhibitor 35 295 IPR032675 -
Mal2g1883 368 SUPERFAMILY F-box domain 39 87 IPR036047 GO:0005515
Mal2g1883 368 PANTHER F-BOX SKP2A-LIKE PROTEIN 1 350 - -
Mal2g1883 368 PANTHER UNCHARACTERIZED 1 350 - -
Mal2g1883 368 SUPERFAMILY RNI-like 77 282 - -
Mal2g1883 368 Pfam F-box-like 40 73 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1883 Mal-Chr2 22746369 22748513 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1883 K03875 - gmx:100797840 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1883 2 22746369 22748513 Mal2g1883 2 22746369 22748513 ECH