Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1866 ATGCAACAAACCACAAAAATTCGTGGAATCACAAAGTGTTTAAACCCATCAAATTGGTCTTATTCAATAAGAAACAATAGTACCAACCAAGCATCATTGAAAAAGACTCTTTTTATATACAAACAAATTCGCCAAGAAGGAACACACGACCCAACCCTGATCCCTCAGTTGCTCAAAGCATGTGATTCTCTTCCCTTCCTTCATTACGTCAAAACCTTGCACGCAGAGTCCATCAAAGCCGGTTCCGACATCAACGTGTTCATCGGAACCGCATTTGTTGCTTCATATGCAAAATGCGGCGTTGTTTGGGATGCACGCAAGGTGTTTGATGTTATGCCTGATAGAAATGTTGTGACATGGAATGCAATGGTTGGTGGGTATTTGAGAAATGGTGACACTGAATCTGCTTTACTTGCGTTTGAAGAAATGCCGTGGAAATCGAGGGTGAGTTGGAGTCAGATGATTGGTGGGTTTGCTAGAAATGGTGACACTTTAACTGCTAGGAAGTTTTTTGATAAGGTTCCGTATGAGTTGAAAGATGTGGTGATATGGACTGTGATGGTTGATGGGTATGCTAAGAAAGGGGAAATGGAAGATGCAAGAGAGGTTTTTGAGTTAATGCCTGAAAGGAATTGCTTTGTTTGGTCGTCTATGGTTTGTGGGTATTGCAAGAAGGGTAGTGTTATGGAGGCTGAGGCAATTTTTCGACGAGTTCCGGTTCGGAATTTGGAGATATGGAATTCCATGATTGGTGGTTATGTACATAATGGATTTGGTGAGAAAGCATTGGAGGCTTTTGAGGAAATGGGTGTGGAAGGGTTTGAGCCGGATGAGTTCACTGTTGTTAGTGTTTTATCGGCTTGTGCTCAGCTTGGAGACCTGGATGTTGGCAAGCAAATCCATCACATGATTGAATGTAAAGGAATAGCTGTGAACCAATTTATTTTGAGTGGACTGGTTGATATGTATGCGAAATGTGGGGACTTGGTTAATGCAAGGTTGGTATTTGAAAGTTTCAATGAGAGGAATGTTTTCTGCTGGAATGCTATGATTTCGGGTTTCGCCGTGAATGGAAAATGCAAGGAGGTTTTTGAGTATTTGGGCAGGATGGAGGAGTCAAATGTAAAGCCTGATGCTGTCACATTTACCACTGTACTCTCGGCTTGTGCTCATGGAGGTTTGGTGAGTGAAGCAATGGAAGTAATATCTACAATGGAGGCATATGGAATTGAAATGGGCATCAGGCATTATGGATGCATGGTTGACCTCTTGGGAAGAGCAGGGAGGTTAAAGGAAGCATACGAGTTAATAAAAAGAATGCCAATGAAACCTAATGAAACAGTTTTGGGGGCAATGCTTGGTGCTTGCTGGATTCATTCAGATATGAAAATGGCAGAACTAGTTAATAAGATGATTGGTGCTGACTCTGCTACATGTGCTAATTCCCACAATGTGCTTCTGTCAAATATCTACGCAGCTTCAGAAAAATGGGAGAAAGCTGAAATGATAAGGAGGAACATGGTTGATAGATGGTCTGAAAAGATACCAGGGTTTTTTGTGATCAAGGTAGAAAAGCAACAATCAAGAATGGTCAACTTCATAACAGACTATTTAGTTTCCACCCTGACTAAGCATAGCAATGTAACAAAACTGTTTTGGTATATTGAAGGTATAGAGACTTTACATATTTGA 1692 0.4108 MQQTTKIRGITKCLNPSNWSYSIRNNSTNQASLKKTLFIYKQIRQEGTHDPTLIPQLLKACDSLPFLHYVKTLHAESIKAGSDINVFIGTAFVASYAKCGVVWDARKVFDVMPDRNVVTWNAMVGGYLRNGDTESALLAFEEMPWKSRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELMPERNCFVWSSMVCGYCKKGSVMEAEAIFRRVPVRNLEIWNSMIGGYVHNGFGEKALEAFEEMGVEGFEPDEFTVVSVLSACAQLGDLDVGKQIHHMIECKGIAVNQFILSGLVDMYAKCGDLVNARLVFESFNERNVFCWNAMISGFAVNGKCKEVFEYLGRMEESNVKPDAVTFTTVLSACAHGGLVSEAMEVISTMEAYGIEMGIRHYGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLGAMLGACWIHSDMKMAELVNKMIGADSATCANSHNVLLSNIYAASEKWEKAEMIRRNMVDRWSEKIPGFFVIKVEKQQSRMVNFITDYLVSTLTKHSNVTKLFWYIEGIETLHI* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1866 563 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 378 412 IPR002885 -
Mal2g1866 563 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 343 377 IPR002885 -
Mal2g1866 563 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 116 150 IPR002885 -
Mal2g1866 563 PANTHER BNACNNG13520D PROTEIN 15 518 - -
Mal2g1866 563 Pfam PPR repeat family 243 289 IPR002885 -
Mal2g1866 563 Pfam PPR repeat family 342 390 IPR002885 -
Mal2g1866 563 Pfam PPR repeat 182 212 IPR002885 -
Mal2g1866 563 Pfam PPR repeat 149 173 IPR002885 -
Mal2g1866 563 Pfam PPR repeat 214 238 IPR002885 -
Mal2g1866 563 Pfam PPR repeat 416 441 IPR002885 -
Mal2g1866 563 Pfam PPR repeat 118 144 IPR002885 -
Mal2g1866 563 Pfam PPR repeat 91 117 IPR002885 -
Mal2g1866 563 Gene3D Tetratricopeptide repeat domain 314 530 IPR011990 GO:0005515
Mal2g1866 563 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Mal2g1866 563 PANTHER OS01G0913400 PROTEIN-RELATED 15 518 - -
Mal2g1866 563 SUPERFAMILY TPR-like 30 229 IPR011990 GO:0005515
Mal2g1866 563 TIGRFAM PPR: pentatricopeptide repeat domain 417 440 IPR002885 -
Mal2g1866 563 TIGRFAM PPR: pentatricopeptide repeat domain 380 412 IPR002885 -
Mal2g1866 563 TIGRFAM PPR: pentatricopeptide repeat domain 118 143 IPR002885 -
Mal2g1866 563 TIGRFAM PPR: pentatricopeptide repeat domain 245 278 IPR002885 -
Mal2g1866 563 TIGRFAM PPR: pentatricopeptide repeat domain 214 238 IPR002885 -
Mal2g1866 563 TIGRFAM PPR: pentatricopeptide repeat domain 345 379 IPR002885 -
Mal2g1866 563 TIGRFAM PPR: pentatricopeptide repeat domain 182 212 IPR002885 -
Mal2g1866 563 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 242 276 IPR002885 -
Mal2g1866 563 Gene3D Tetratricopeptide repeat domain 29 146 IPR011990 GO:0005515
Mal2g1866 563 Gene3D Tetratricopeptide repeat domain 212 305 IPR011990 GO:0005515
Mal2g1866 563 Gene3D Tetratricopeptide repeat domain 147 211 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1866 Mal-Chr2 22552688 22556027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1866 50 510 Glycoside Hydrolase AT3G49170 32.068 5.16e-65 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1866 - - mtr:MTR_3g089880 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1866 2 22552688 22556027 Mal2g1866 2 22552688 22556027 ECH