Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1864 ATGAGTCGTCGAGGAATGGATCGTGACGATGAAGACGATGAGGAGTATGAAGAGCAGGTTGAAGATTTCGATGAAGAGGAAGCGGAGGAGGAGGTGGAAGATAGAGGCGGCCGTGGAAAGAAGCGGAGAAGATCTAGTTTTATCGATGATGATGCGGAGGAGGTAGATGAAGATGAAGAGGAGGATTATGAGGATTATGATGATGCTGATTATGACGGAGGCGGTGGTAAAAGCAGCCGGAAGCGTCCATATAAGAAGACCTCCGCTTCGAATTTCTTTGATGAGGAGGCTGCTGTTGATTCTGATGAAGACGAGGAAGAAGAAGAAGGCGAAGACGACTTCGTTATTCCTCCTGGAAGTGATCTGCAAGATGAAGATGATAACAGAAGGAGGCCACATCACAGACAGCCACCCCACCAAGAAGAGCAAGAAGACCTTGAAGAGATGGCAAGAAGGATACAAGAGAGATATGGAAAGCAGCGGTTGGCAGAATATGATGAAGAAACTACAGATGTTGAACAACAAGCACTTTTACCATCTGTGAGAGACCCAAAGCTGTGGATGGTCAAATGTGCGATTGGCCGTGAGCGTGAAACAGCTGTTTGCCTCATGCAAAAGTACATAGATAAGGGGTCAGAATTGCAAATCAGATCAGCTATTGCTCTTGATCATCTCAAAAACTATATATATGTGGAAGCAGATAAAGAAGCTCATGTTAGAGAGGCTTGCAAAGGTCTTCGCAATATATTTGGACAAAAAATAACGCTTGTTCCAATAAGAGAAATGACTGATGTGCTCTCAGTTGAAAGCAAAGCCATTGATCTTGCGAGAGATACTTGGGTTAGAATGAAGATTGGGACATACAAGGGGGACCTCGCCAAAGTAGTGGATGTTGATAATGTACGGCAGAGGGTTACTGTGAAACTAATTCCGAGGATAGATTTACAGGCTCTCGCAAACAAATTGGAAGGTAGAGAAGTTGTGAAAAAGAAGGCATTTGTCCCCCCTCCTCGTTTTATGAACGTTGAAGAAGCTAGGGAACTGCATATCCGTGTGGAGCATAGGCGTGATGCTAATCGGGGGGAACGGTTTGACGCCATTGGAGGCATGTTGTTCAAAGATGGGTTCTTATACAAAACCGTGTCTATAAAATCCCTTTATTCCCAAAACATCAAACCTACGTTTGACGAGCTCGAAAAATTTCGTAAACCGGGTGAGAGTGGAGATGTAGCCGGTCTGTCAACTCTGTTTGCGAACAGAAAGAAAGGGCATTTCATGAAAGGTGATGCTGTTATTGTCATCAAGGGCGATTTGAAGAATTTAAAGGGATGGGTGGAGAAAGTTGATGAGGATAATGTTCATATAAGACCAGAAATGAAGGACTTGCCTAAAACTCTTGCAGTAAATGAAAAGGAACTTTGTAAATATTTTGAACCTGGAAACCATGTTAAAGTTGTTTCTGGTGCTCAAGAGGGTGCTACTGGTATGGTTGTGAAGGTGGAGCAGCATGTCCTGATCTTAATATCTGATACCACAAAGGAGCATATCCGTGCGTTTGCAGATGATGTTGTAGAGAGTTCTGAAGTAACCACTGGTGTGACTAAAATTGGGGACTATGAACTTCGTGATCTTGTATTGCTAGATAATTTGAGTTTTGGTGTCATAATCCGTGTAGAAAGTGAGGCATTTCAGGTTCTTAAGGGTGTTCCTGACAGACCTGAAGTTGTGCTTGTTAAATTAAGAGAGATCAAGTGTAAGATAGAGAAGAAAATAAATGTGCAGGATAAGTTTAGGAATACAGTATCATCAAAAGATGTTGTGCGGATTCTTGATGGTCCCTGCAAAGGCAAACAAGGTTCTGTGGAGCACATATATAGAGGGATCTTGTTCGTCTTTGATCGCCATCATCTTGAACATGCAGGCTTTATATGTGTTAAGGCCCAATCATGTGTAGTTGTGGGAGGTTCACGCTCCAATGGTGACAGAAATGGTGATGTACACTCGAGATTCCCGGGTCTTAGAACTCCACCTCGCATTCCACAGTCCCCAAATAGGTTTTCTCGAGGAGGGCCTCCATCTGCTGGAGGTAGACATAGGGGTGGAAGGGGGCATGATGGTTTGACAGGGGCAACTGTTAAAGTACGTCAGGGTTCCTATAAAGGTTATCGCGGACGTGTTATAGAAGTTAAAGGATCATTTGTTCGGGTTGAATTGGAGTCCCAAATGAAGGTTGTAACTGTTGACCGCAATCATATATCTGACAATGTGGCTGTTACCCCACATCGTGAAACATCTCGATATGGGATGGGAAGTGAAACCCCAATGCATCCATCTCGAACTCCTTTGCATCCATATATGACTCCGATGAGAGATGCCGGAGCAACTCCAATTCATGATGGAATGAGGACACCTATGCGTGACCGAGCTTGGAATCCATATGCACCAATGAGTCCTCCTAGGGATAACTGGGAAGATGGAAATCCAGGCTCTTGGGGGGCCAGTCCACAGTACCAGCCAGGAAGCCCTCCTTCCCGGCCATATGAAGCCCCAACTCCTGGTGCTGGTTGGGCTAGTACTCCTGGTGGTAATTATAGTGAGGCTGGAACACCACGGGACAGTTCTGCCTATGCGAATGCTCCAAGCCCATATTTACCATCAACACCAGGGCAGCCTATGTCACCAAATTCTGCGTCTTATCTTCCTGGCACCCCTGGAGGACAGCCTATGACTCCAGGAACTGCTGGTCTGGACATTATGTCCCCAGTATTGGGTGGGGACAATGAAGGGCCTTGGTTTATGCCAGACATATTGGTCAATGTACACAGGGCCGGAGAGGAGTCTGTTGGAGTTATAAAAGAAGTTCTTCCGGATGGTTCTTATAGGGTAGCTCTTGGGTCTAGTGGAAATGGTGAAACAATATCGGCCCTTTCCACTGAAGTGGAAGCTGTAGTGCCAAGAAAATCCGATAAAATAAAGATAATGGGTGGGGCGCTACGTGGTTCCACTGGCAAGTTGATTGGTGTTGATGGCACTGATGGCATAGTAAAAGTAGATGACACATTGGATGTCAAGATTTTAGACTTGGATATTCTGGCGAAATTAGCTCAACCATGA 3114 0.4502 MSRRGMDRDDEDDEEYEEQVEDFDEEEAEEEVEDRGGRGKKRRRSSFIDDDAEEVDEDEEEDYEDYDDADYDGGGGKSSRKRPYKKTSASNFFDEEAAVDSDEDEEEEEGEDDFVIPPGSDLQDEDDNRRRPHHRQPPHQEEQEDLEEMARRIQERYGKQRLAEYDEETTDVEQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSAIALDHLKNYIYVEADKEAHVREACKGLRNIFGQKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVVKKKAFVPPPRFMNVEEARELHIRVEHRRDANRGERFDAIGGMLFKDGFLYKTVSIKSLYSQNIKPTFDELEKFRKPGESGDVAGLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEDNVHIRPEMKDLPKTLAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVEQHVLILISDTTKEHIRAFADDVVESSEVTTGVTKIGDYELRDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREIKCKIEKKINVQDKFRNTVSSKDVVRILDGPCKGKQGSVEHIYRGILFVFDRHHLEHAGFICVKAQSCVVVGGSRSNGDRNGDVHSRFPGLRTPPRIPQSPNRFSRGGPPSAGGRHRGGRGHDGLTGATVKVRQGSYKGYRGRVIEVKGSFVRVELESQMKVVTVDRNHISDNVAVTPHRETSRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEDGNPGSWGASPQYQPGSPPSRPYEAPTPGAGWASTPGGNYSEAGTPRDSSAYANAPSPYLPSTPGQPMSPNSASYLPGTPGGQPMTPGTAGLDIMSPVLGGDNEGPWFMPDILVNVHRAGEESVGVIKEVLPDGSYRVALGSSGNGETISALSTEVEAVVPRKSDKIKIMGGALRGSTGKLIGVDGTDGIVKVDDTLDVKILDLDILAKLAQP* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1864 1037 Gene3D - 689 755 IPR014722 -
Mal2g1864 1037 ProSitePatterns Ribosomal protein L24 signature. 428 445 IPR005825 GO:0003735|GO:0005840|GO:0006412
Mal2g1864 1037 MobiDBLite consensus disorder prediction 51 69 - -
Mal2g1864 1037 SUPERFAMILY Translation proteins SH3-like domain 468 527 IPR008991 -
Mal2g1864 1037 CDD KOW_Spt5_3 476 526 IPR041976 -
Mal2g1864 1037 MobiDBLite consensus disorder prediction 798 921 - -
Mal2g1864 1037 CDD KOW_Spt5_2 425 475 IPR041975 -
Mal2g1864 1037 MobiDBLite consensus disorder prediction 122 147 - -
Mal2g1864 1037 MobiDBLite consensus disorder prediction 96 120 - -
Mal2g1864 1037 MobiDBLite consensus disorder prediction 33 50 - -
Mal2g1864 1037 CDD KOW_Spt5_6 979 1035 IPR041980 -
Mal2g1864 1037 CDD KOW_Spt5_4 604 646 IPR041977 -
Mal2g1864 1037 Pfam KOW motif 479 504 IPR005824 -
Mal2g1864 1037 SUPERFAMILY Translation proteins SH3-like domain 417 455 IPR008991 -
Mal2g1864 1037 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT5 24 1035 - -
Mal2g1864 1037 Gene3D - 165 267 IPR036735 GO:0006355
Mal2g1864 1037 Gene3D - 274 316 IPR014722 -
Mal2g1864 1037 MobiDBLite consensus disorder prediction 10 32 - -
Mal2g1864 1037 SMART nusgn_4 183 269 IPR006645 GO:0140673
Mal2g1864 1037 Gene3D - 479 528 IPR014722 -
Mal2g1864 1037 CDD NGN_Euk 185 267 IPR039385 -
Mal2g1864 1037 Pfam Early transcription elongation factor of RNA pol II, NGN section 185 266 IPR005100 -
Mal2g1864 1037 PANTHER SUPPRESSOR OF TY 5 24 1035 IPR039659 GO:0006357|GO:0032784
Mal2g1864 1037 MobiDBLite consensus disorder prediction 656 709 - -
Mal2g1864 1037 Pfam Spt5 transcription elongation factor, acidic N-terminal 92 179 IPR022581 -
Mal2g1864 1037 MobiDBLite consensus disorder prediction 1 147 - -
Mal2g1864 1037 SMART kow_9 274 301 IPR005824 -
Mal2g1864 1037 SMART kow_9 476 503 IPR005824 -
Mal2g1864 1037 SMART kow_9 705 732 IPR005824 -
Mal2g1864 1037 SMART kow_9 600 627 IPR005824 -
Mal2g1864 1037 SMART kow_9 424 451 IPR005824 -
Mal2g1864 1037 SMART kow_9 984 1011 IPR005824 -
Mal2g1864 1037 Coils Coil 6 33 - -
Mal2g1864 1037 MobiDBLite consensus disorder prediction 862 883 - -
Mal2g1864 1037 CDD KOW_Spt5_5 707 753 IPR041978 -
Mal2g1864 1037 CDD KOW_Spt5_1 278 315 IPR041973 -
Mal2g1864 1037 PIRSF Spt5 2 1037 IPR017071 GO:0006357|GO:0032784
Mal2g1864 1037 Gene3D - 419 476 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1864 Mal-Chr2 22532932 22540018 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1864 K15172 - gmx:100784916 1678.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1864 2 22532932 22540018 Mal2g1864 2 22532932 22540018 ECH