Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1860 ATGACAATATGCACCCAATCACATGCGTGGACTCCACCACAATCACAATGTTATATAATGGCCCCATCGAAAACATTCCTAAAAGCCCAGAAGACACACTCCATGTCTCCCGAAAAGAAAGAAGTGTTCAAATCACTAGAGAAATGGGTATCACAAAGTGTGTTGCCATTGGTGAAACCTGTGGAGGAATGCTGGCAGCCACATGATTTGTTGCCAGACTCATCACTACCATCCGATGAGTTCATCCATCAAGTGAAGGCCTTGAGAGATCGAACGGCTGAGCTTCCAGATGATTATCTTGTGGCTTTGGTCGGTGACATGATCACTGAGGAAGCATTGCCTACGTACCAAACATGGATAAACAAGTTGGATGGAGTTGGGGACGAGACTGGTTCAAGTCTCACACCATGGGCTATATGGTCACGCTCTTGGACTGCTGAAGAAAATAGACATGGAGATTTACTCAAAACTTATCTCTATCTCTCCGGCCGAGTTGATATGTGCATGATTGAGAAGACCATCCAATATTTGATTGGAGCTGGCGTGGATGTAGGTACAGAAAACAACCCATACATGGGTTTTGTGTACACATCCTTTCAAGAGCGAGCCACATTTGTGTCACACGGCAACCTAGGTAGGTTAGCTAAAGAGAGAGGTGATATGGTGCTTGCACGCATATGTGGAACCATTGCTGCAGATGAAAAGCGCCATGAGAATGCATATGTGAGAATTGTGGAGAAGCTTCTAGAAGTGGACCCCACAGAGGCTATGATTGCCATATCAAAGATGATGCAACACAAGATTACAATGCCAGCACACTTAATGCATGATGGACAAGACACACGCCTCTTTGATCATTTTTCCTCTGTGACACAACGTATTGGGGTGTACACGACCAATGATTACATTGATATCTTAGAGTTTCTGATAAGAAGGTGGAGATTGGAGAAGATTGAAGGCTTGACAAGTGAAGGGCAACATGCACAAGAGTTCGTGTGTGAACTTGCACCTAGATTAAGGAGACTTCAAGAACGTCTTCATGAGCGAACAAGTAAGATCAACCACAAATTCACTTGGATCTTCAATAAAGAAGTGTCCTTGTGA 1104 0.4402 MTICTQSHAWTPPQSQCYIMAPSKTFLKAQKTHSMSPEKKEVFKSLEKWVSQSVLPLVKPVEECWQPHDLLPDSSLPSDEFIHQVKALRDRTAELPDDYLVALVGDMITEEALPTYQTWINKLDGVGDETGSSLTPWAIWSRSWTAEENRHGDLLKTYLYLSGRVDMCMIEKTIQYLIGAGVDVGTENNPYMGFVYTSFQERATFVSHGNLGRLAKERGDMVLARICGTIAADEKRHENAYVRIVEKLLEVDPTEAMIAISKMMQHKITMPAHLMHDGQDTRLFDHFSSVTQRIGVYTTNDYIDILEFLIRRWRLEKIEGLTSEGQHAQEFVCELAPRLRRLQERLHERTSKINHKFTWIFNKEVSL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1860 367 CDD Acyl_ACP_Desat 38 345 IPR005067 GO:0006631|GO:0045300
Mal2g1860 367 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 15 367 - -
Mal2g1860 367 ProSitePatterns Fatty acid desaturases family 2 signature. 288 307 IPR005803 GO:0006633|GO:0016491
Mal2g1860 367 Pfam Fatty acid desaturase 38 361 IPR005067 GO:0006631|GO:0045300
Mal2g1860 367 Gene3D Ribonucleotide Reductase, subunit A 21 367 IPR012348 GO:0016491
Mal2g1860 367 SUPERFAMILY Ferritin-like 26 365 IPR009078 -
Mal2g1860 367 PIRSF Dlt9_acylACP_des 1 367 IPR005067 GO:0006631|GO:0045300
Mal2g1860 367 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 15 367 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1860 Mal-Chr2 22390229 22392752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1860 13 367 Acyl Lipid Metabolism Gene Families AT1G43800 67.500 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1860 K03921 - egr:104449632 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1860 2 22390229 22392752 Mal2g1860 2 22390229 22392752 ECH