Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1517 ATGAATCTTCAAATTGCAAACACCATCGATTTTCTTCAACTCCCCAAACCCTTATTCCCTCGTAAAACCTTCTTCTTCACCCAATTCCCTCATTCTTCTCTTTCTCAACGCCTTCGTATAACCAAATTTCCACACACCAACCCTCGCAAATCCTTTCTCAGAATCACCGCTTCCAATGCTTCCAATTCTCTTTCAGTTTCAAATACATCTTCCTCCAACAAAGAAGACGCTGAATCTATTCAGCTTTTCGAGGAACTGAAGGAGTCCGAAAGGAAACGGGCGAATGAGATGGAAGAACTTGAGAGGAAGGCTAATGTGCAGTTAGATAGGCAGCTTGTTATGGCTTCTTCATGGAATAGGGCTTTGTTGACATTTCGTGGAAAATTGAAGGGGACTGAATGGGATCCTGAAAATTCACATAGGATTGATTTCAGTGATTTTTTGAAACTGCTTGATACGAATAATGTTCAGTTTATTGAGTACTCTGATTATGGACAAACCTTATCAGTTGTTTTACCATATTACAAGAATGGAAAAACATCAGGCACTGAAGGGAATCCTAAGGATATTGTTTTTCGGCGTCATGCGGTTGATCGAATGCCGATTGATTGTTGGAATGATGTTTGGGGAAAGCTCCATCAACAAATTGTAAATGTTGATGTCATTAATGTAGATGCTGTACCTGCTGAAGTATACTCAACAGTTGCAACTGCAGTCGTATGGTCTATGCGTCTTGCCCTGGCCGTTGGATTTTATGTTTGGATTGATAATTTGATGAGACCAATATATGCAAAGTTGATACCTTGTGATTTGGGAACTCCTCCAGCTACCCCACAAACTAAGCTGCCAGCCTTAAGAAGCCATGCACTTGGTTCTCTAGGCAAAAGTCGGGCTAAATTTATATCTGCAGAAGAAAGAACCGGTGTTACGTTTGATGATTTTGCTGGCCAGGAATATATAAAGAGGGAACTACAAGAGATTGTCCGAATTTTAAAGAATGAGGAGGAGTTTCAAGACAAAGGAATTTATTGTCCAAAAGGTGTTCTTCTTCATGGACCTCCTGGAACCGGTAAAACTTTACTGGCTAAAGCCATCGCAGGTGAAGCAGGGTTGCCTTTTTTTGCTGCAAGTGGCACGGATTTTGTAGAGATGTTTGTAGGGGTTGCTGCATCCCGTGTTAAAGATCTTTTTGCTAGTGCAAGATCATTTGCGCCTTCTATAATCTTTGTTGATGAGATTGATGCTATTGGTAGCAAGCGTGGAGGACCTGATATTGGTGGAGGAGGTGCTGAAAGGGAACAAGGATTACTTCAGATACTGACTGAGATGGACGGTTTCAAAGTTTCCACAGCACAGGTGCTCGTGATAGGTGCTACAAATAGATTGGATATTCTTGATCCTGCTCTTTTGAGGAAGGGTCGTTTCGACAAGATCATTAGAGTTGGCTTACCTTTAAAAGATGGAAGACTTGCCATTTTGAAGGTGCATGCTATGAATAAGTCTTTTCGCTCAGAAGAAGAAAAGGATACTCTACTGACGGAAATTGCAGAGCTAACAGAAGATTTTACTGGGGCAGAGCTGCAAAATATACTGAATGAAGCTGGAATTTTAACGGCCAGGAAGGATCTGGATTACATCGGGCGTGACGAGTTAGTTGAGGCATTAAAAAGGCAAAAAGGAACATTTGAAACAGGGCAAGAGGATACTACAGAAATTCCTGAAGATCTGAGACTTAGATTGGCATATAGAGAAGCAGCTGTGGCTGTTCTTGCATGTTATTTTCCTGAACCGCACCGCCCTATTGTTGAGACTGATATAAGTTCTATTCACAGCCAGCCAAATATGTGTTATAAAGAAAGTTCTGGAAAGGTTTTTGCTCGGAAATCAGATTACATAAACTCTATAGTGCGTTCTTGTGCTCCAAGAGTAATTGAGGAGGAGATGTTTGGGATCGACAACTTGTGTTGGATGTCGGCCAATGCAACATCAGAAGCTTCAAGGCTCGCAGAATTTTTGATTCTGAAGACTGGAATGACTGCATTTGGGAAAGCATATTACAGAAACGAAAGCGATCTTGTGCCTAATCTTGCAGTGAAGCTTGAAGCACTCCGAGATGAGTATATACGTTATGGGACAGAGACGTGTTCATCTGTGCTAAAAGAATACCATTCAGCGGTTGAGACAATCACAGATATTTTGCTTGAAAAGGGGAAAATCAAAGCTGAGGAGATTTGGGACATTTATAAGAGTGCTCCTCGTGTAGCTCAGCCTTCGGTGAGTCCACTTGATGAATATGGAGCACTGATTTATGCTGGACGATGGGGAATCCACGGGATTAGTCTTCCTGGAAGGGTTACATTTGCACCGGGCAATGTTGGATTTTCGACCTTTGGTGCACCACGTCCTACAGAGACGCAAATTGTTAATGATGAAACGTGGAAACTAGTAGATGATATCTGGGATAAAAATGTTCAAGATATTAGAGATGGAGCTTCAAGGGCGATTGAAGAAGAGAAAGAAAAGCCACAGCTTTTGATGGCAAGTCATTTCCTCTGA 2556 0.4171 MNLQIANTIDFLQLPKPLFPRKTFFFTQFPHSSLSQRLRITKFPHTNPRKSFLRITASNASNSLSVSNTSSSNKEDAESIQLFEELKESERKRANEMEELERKANVQLDRQLVMASSWNRALLTFRGKLKGTEWDPENSHRIDFSDFLKLLDTNNVQFIEYSDYGQTLSVVLPYYKNGKTSGTEGNPKDIVFRRHAVDRMPIDCWNDVWGKLHQQIVNVDVINVDAVPAEVYSTVATAVVWSMRLALAVGFYVWIDNLMRPIYAKLIPCDLGTPPATPQTKLPALRSHALGSLGKSRAKFISAEERTGVTFDDFAGQEYIKRELQEIVRILKNEEEFQDKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAASGTDFVEMFVGVAASRVKDLFASARSFAPSIIFVDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTAQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPLKDGRLAILKVHAMNKSFRSEEEKDTLLTEIAELTEDFTGAELQNILNEAGILTARKDLDYIGRDELVEALKRQKGTFETGQEDTTEIPEDLRLRLAYREAAVAVLACYFPEPHRPIVETDISSIHSQPNMCYKESSGKVFARKSDYINSIVRSCAPRVIEEEMFGIDNLCWMSANATSEASRLAEFLILKTGMTAFGKAYYRNESDLVPNLAVKLEALRDEYIRYGTETCSSVLKEYHSAVETITDILLEKGKIKAEEIWDIYKSAPRVAQPSVSPLDEYGALIYAGRWGIHGISLPGRVTFAPGNVGFSTFGAPRPTETQIVNDETWKLVDDIWDKNVQDIRDGASRAIEEEKEKPQLLMASHFL* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1517 851 Gene3D - 484 564 - -
Mal2g1517 851 CDD AAA 315 483 - -
Mal2g1517 851 PANTHER METALLOPROTEASE M41 FTSH 54 819 - -
Mal2g1517 851 ProSitePatterns AAA-protein family signature. 453 471 IPR003960 GO:0005524|GO:0016887
Mal2g1517 851 Pfam AAA+ lid domain 512 551 IPR041569 -
Mal2g1517 851 Gene3D - 292 482 IPR027417 -
Mal2g1517 851 Pfam ATPase family associated with various cellular activities (AAA) 348 482 IPR003959 GO:0005524|GO:0016887
Mal2g1517 851 PANTHER INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 4, CHLOROPLASTIC-RELATED 54 819 - -
Mal2g1517 851 Gene3D Peptidase M41 566 753 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mal2g1517 851 Coils Coil 80 106 - -
Mal2g1517 851 SMART AAA_5 344 485 IPR003593 -
Mal2g1517 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 557 IPR027417 -
Mal2g1517 851 SUPERFAMILY FtsH protease domain-like 573 753 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1517 Mal-Chr2 18170640 18179814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1517 309 592 Miscellaneous Gene Families AT3G47060 47.183 3.51e-68 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1517 - - gmx:100804743 1401.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1517 2 18170640 18179814 Mal2g1517 2 18170640 18179814 ECH