Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1498 ATGGAATCAGAGAAAACAACTCTCTTCATCCTTGGATCATACACAAAACCATCATGCTCAATCTTGTTTCTCTTCTTCACATTCCTCACTATCCTCTCTCTTCAATTCTCCACCCGTTCTCTCTTCCCTCTTTCCATCCTCCTCTCCCAACCACAACCCTCCCTCCTCGATCCCACCACCTGCTCCTCCTTTTTCCACCACGTTCCTCCCAGAAAACTCATCATGTCGATCGTTGACTTCGGCGGCGTTGGCGATGGCAAAACCTCCAACACCCAATCGTTTCAAAGAGCGATTCGTTACATGCAACGTTTTCGGGGTAAAGGTGGGTCCCAGCTTAATATTCCCAATGGAACGTGGCTTACCGGTAGTTTTAATCTCACCAGTGATTTCACGCTTTTTCTTCATCACGGTGCTGTTATTCTGGGTTCTCAGGATCCAAAAGAATGGCCTATTATTGAACCATTGCCATCTTATGGAAGGGGAAGAGAGAGGTTAGGAGGAAGACATATTAGCCTTATACATGCAAATGGGGTCCGTAATGTTGTCATTACAGGAGAAAATGGGACAGTTGATGGTCAAGGGAAGATGTGGTGGGAACTTTGGTGGAACAGAACATTGGTGCACACAAGAGGCCACCTCCTTGAACTCATGAACTCAGAAAATGTTCTAGTTTCAAACCTCACTTTTAGAAATTCTCCTTTTTGGACCATCCACCCTGTTTACTGCAGTAATGTTGTGATCAAAGGGATGACAATCTTGGCTCCTCTTAATGCCCCAAATACTGATGGCATCGACCCAGACTCGAGTACCAACGTGTGTATTGAAGATAACTACATAGAAAGTGGGGATGATCTTGTAGCCATCAAGAGTGGTTGGGATCATTATGGTATCGCCATGGCTAAGCCTAGCACAAACATCATAGTAAGGAGAGTTTCAGGCACGACCCCAACTTGCTCTGGAGTAGGAATAGGCAGTGAGATGTCTGGTGGAATCTCAAATATTACAATCGAGAATTTGCACGTGTGGAATTCTGCAGCCGGTGTTCGCATAAAATCTGATAATGGTAGAGGCGGTTATATAACAAATGTGAGTATAAGCAATATAAGAATGGAGAGAGTGAAGATACCAATTAGGTTCAGTAGAGGTTCAAACGATCATCCTGATGATGGGTGGGATCCAAAAGCTGTTCCTAGATTTAAAGATATTTTAATCAGCAATGTGGTCAGTGTAAATTCAACAAAAGCTCCAGTTTTGGAAGGTGTAAAAGGTTCATCATTCGAAGGCTTGTGCTTCAAGAATATTACTCTTCTTGGTGTATCCTTATCTGCAACATGGCATTGTGAATATGTAGCTGGTTTCACCAATGGGGTCTTCCCTGTTCCGTGTCCTGAGTTGCAGTACAATGGCACTTCATCCTGGTGTTGA 1425 0.4386 MESEKTTLFILGSYTKPSCSILFLFFTFLTILSLQFSTRSLFPLSILLSQPQPSLLDPTTCSSFFHHVPPRKLIMSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNLTSDFTLFLHHGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITGENGTVDGQGKMWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGIAMAKPSTNIIVRRVSGTTPTCSGVGIGSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYITNVSISNIRMERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVKGSSFEGLCFKNITLLGVSLSATWHCEYVAGFTNGVFPVPCPELQYNGTSSWC* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1498 474 PANTHER PECTIN LYASE-RELATED 11 474 - -
Mal2g1498 474 SMART pbh1 269 301 IPR006626 -
Mal2g1498 474 SMART pbh1 360 381 IPR006626 -
Mal2g1498 474 SMART pbh1 303 325 IPR006626 -
Mal2g1498 474 SMART pbh1 242 268 IPR006626 -
Mal2g1498 474 SMART pbh1 331 352 IPR006626 -
Mal2g1498 474 SUPERFAMILY Pectin lyase-like 65 467 IPR011050 -
Mal2g1498 474 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 11 474 - -
Mal2g1498 474 Pfam Glycosyl hydrolases family 28 171 451 IPR000743 GO:0004650|GO:0005975
Mal2g1498 474 Gene3D - 64 453 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1498 Mal-Chr2 17969626 17972235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1498 1 474 Glycoside Hydrolase AT4G33440 68.067 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1498 - - mtr:MTR_3g096330 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1498 2 17969626 17972235 Mal2g1498 2 17969626 17972235 ECH