Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1478 ATGGGTGGACGCGCCATAACCGTCCTGAACGTGGCGGAGAAGCCGTCCGTGGCGAAATCGGTGGCGAACATACTCTCAAGGAACCAAGGTCTTCGCGTAAAAGACGGTCGTTCTCGCTACAACAGAATCTTCGAATTCAACTACACCATTGGTGGCCAACCCTGTCAAATGCTCTTCACCTCCGTCATCGGTCACCTCATGGAGCTTGAATTTGACGATCGTTACCGGAAATGGCATTCTTGTGATCCCGCCGATCTCTTCCAGGCTCCGGTCCATAAAACCGTTCCCGAGGATAAAAAGGATATTAAGAGGACACTAGAGGAAGAAGCTAGGCGGTGTCAGTGGCTTGTTTTGTGGCTTGATTGTGATAGGGAAGGGGAGAATATCGCGTTTGAAGTTGTCGATGTGTGTGCTGCGGTAAATCCGAATCTTACTATCAAGAGAGCTCGATTTTCTGCATTGATTGACAGGGAAATCCATCAGGCTGTGCAGAATCTCGTTGCGCCTAATAAGTTTTTTGCTGATGCCGTGGATGCTAGGCAGGAAATAGATCTTCGTATAGGTGCTTCTTTCACCAGATTTCAGACCATGTTAATGAAAGATGCTTTTGTCATTGATACTGTTCCAGATGGCAGAAATATTATCTTGAGTTATGGCCCTTGTCAGTTCCCTACGCTTGGATTTGTTGTGGAAAGATATTGGGAGATACAAGCACATGAACCAGAAGAGTTTTGGTCAATCAATTGTTCTCATAGACCAGATGAATGCGTTGCCAATTTCAGCTGGGGGCGGGGACATTTGTTTGATTATACATGTGCTGTCATGATATATGAGATGTGCATTGAGGAACCAACGGCAACTGTGACAGACGTAAGACCACAGCAGACGCTGAAGTATCCTCCCCATCCCCTGAGTACTATTGAGCTTGAGAAACGGGCCTCAAGATACTTCCGGATGAGCTCTGAGCACACAATGAAGGTGGCAGAAGAACTTTACCAAGGTGGTTTCATCAGTTATCCTCGTACAGAAACTGATAACTTTTCTTCAAGGACTGATTTGCATGCAATTGTGCAAGAACAACAAGGGCATCCTGAATGGGGAATATATGCACAGCGGTTGTTGGACCCTGGAGCGGGACTTTGGAGAAACCCTAGAGGTGGTGGACATGATGATAAGGCTCATCCACCTATCCACCCCACTAAATTTTCTGCTGGAGAATCAGGATGGAGCCAAGACCACCGTAAACTGTATGGGTTGGTTGTTCGCCACTTCCTGGCATGTGTCTCAAAGCCGGCCGTAGGAGCTGAAACCACAGTGGAAATTGATATTGCTGGTGAACTATTTTCGGCAAGTGGGAGGGTTATTCTAGAGAGAAACTACTTGGATGTCTATATCAATGAATCTTGGGGTGAATCAACGATTCCATCATATACTATCGGTCAACAGTTCATTCCAACAACATTGACCCTTGATCCCGGAGTAACCAGACCACCACCTCTTCTTAGTGAAGCGGATTTGCTGAGTTGTATGGAAAAGGAGGGCATTGGTACGGATGCTACGATGCACGATCACATCAAGAAGCTGCTTGATCGATTTTATGCAACTAAGGATGCAAGCATGCGTTTCACACCAACTAATCTGGGTGAAGCACTTGTTATGGGATATGATGACATGGGGTATAAACTATGGAAACCATATCTTAGAGCAGTTATGGAACGCGACATGAAATCAGTCAGTGAAGGGACTAAAAGCAAAGCTGAAGTTTTGGATACTAGCTTGCAGCAGATGAAAGCTTGTTTCTTAGATGCAAGATTAAATAAAGTGAAACTTTTAGAAGCCATGGCAATATTTTTTGAAAGATCAAATAGAGTTGGCAGTGATGAGCAGAATGGAACTGGGGAAGTTGTTCGACGGTGTAGACTTTGCCAAGAATCAGGCCAAGAATCAGATTTGGTGCTAAAGAAAAATCGAGATGGCAATTTTATGGTTGGATGCCGGCGTTACCCTCAGTGTAAAAGTGCTGTCTGGCTCCCTGGATCAGTATCAGAAGCGGTTGTGACCACCAATACTTGCAACAATTGCACTCCTGGTCCTGTTTACCTAATTCAATTCAAGTTTCGGCAGCTGGAAATACCACCAAGCTACGATGTCAACCATTTGGGTTGCATTGGTGGCTGTGACGAGATTCTTACACAGTTGACAGAAATATGCGGCACTGGCTCTCGCATGCCAGCAAGAGCTCGAGGACCTCCTGCATCAACCAGCAACACCAATCATACCAACCCAAGGCCTACTGCGTCAACCAGCAACGCCCATCATACCAACCCAAGGCAAGCAGTTTGTTTGCACTGTCAAGAAACAGGGCATTCTTCTAATGATTGTCCTTCACAGACTCGACGCGCCAGGAATCCCCAATATCCTGGAATGAACCAACAAAATGGGGAATCTTCTGTTGCATGCAGCTCGTGTGGAACACCGTGTGTTTTGCGAACTGCAAATACCGCACAGAACAGGGGCAGGAAGTTCTACTCATGTCAATCACAGGAGTGCAACTTCTTTGTATGGGAGGATAACCTCAATAATGGCAGTGGAGGAAGAAGTTTTACACGTTCAAATAGTATTCCAACATCCAACCGTGGTCGAAATGGTGGCCGTGGATCTCGTGGTAGGGGTCGGAATGGATCTAATTCTTCTAATGGGACATTTGTGTCAGCCACTGGGGATCCTATTTCTGGTAGAAGGTGCTTTACATGCGGTGATCCATCTCACTTTGCTAACGTCTGCCCCAATCGTGGACTCTGA 2802 0.4611 MGGRAITVLNVAEKPSVAKSVANILSRNQGLRVKDGRSRYNRIFEFNYTIGGQPCQMLFTSVIGHLMELEFDDRYRKWHSCDPADLFQAPVHKTVPEDKKDIKRTLEEEARRCQWLVLWLDCDREGENIAFEVVDVCAAVNPNLTIKRARFSALIDREIHQAVQNLVAPNKFFADAVDARQEIDLRIGASFTRFQTMLMKDAFVIDTVPDGRNIILSYGPCQFPTLGFVVERYWEIQAHEPEEFWSINCSHRPDECVANFSWGRGHLFDYTCAVMIYEMCIEEPTATVTDVRPQQTLKYPPHPLSTIELEKRASRYFRMSSEHTMKVAEELYQGGFISYPRTETDNFSSRTDLHAIVQEQQGHPEWGIYAQRLLDPGAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQDHRKLYGLVVRHFLACVSKPAVGAETTVEIDIAGELFSASGRVILERNYLDVYINESWGESTIPSYTIGQQFIPTTLTLDPGVTRPPPLLSEADLLSCMEKEGIGTDATMHDHIKKLLDRFYATKDASMRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKAEVLDTSLQQMKACFLDARLNKVKLLEAMAIFFERSNRVGSDEQNGTGEVVRRCRLCQESGQESDLVLKKNRDGNFMVGCRRYPQCKSAVWLPGSVSEAVVTTNTCNNCTPGPVYLIQFKFRQLEIPPSYDVNHLGCIGGCDEILTQLTEICGTGSRMPARARGPPASTSNTNHTNPRPTASTSNAHHTNPRQAVCLHCQETGHSSNDCPSQTRRARNPQYPGMNQQNGESSVACSSCGTPCVLRTANTAQNRGRKFYSCQSQECNFFVWEDNLNNGSGGRSFTRSNSIPTSNRGRNGGRGSRGRGRNGSNSSNGTFVSATGDPISGRRCFTCGDPSHFANVCPNRGL* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1478 933 ProSiteProfiles Toprim domain profile. 7 152 IPR006171 -
Mal2g1478 933 Gene3D - 772 806 - -
Mal2g1478 933 ProSiteProfiles Zinc finger CCHC-type profile. 781 796 IPR001878 GO:0003676|GO:0008270
Mal2g1478 933 ProSiteProfiles Zinc finger CCHC-type profile. 913 930 IPR001878 GO:0003676|GO:0008270
Mal2g1478 933 Pfam GRF zinc finger 819 858 IPR010666 GO:0008270
Mal2g1478 933 Gene3D - 3 169 - -
Mal2g1478 933 CDD TOPRIM_TopoIA_TopoIII 7 166 IPR034144 -
Mal2g1478 933 Gene3D Topoisomerase I, domain 4 300 430 IPR013826 -
Mal2g1478 933 SMART topIban2 145 246 IPR003601 GO:0003677|GO:0003916|GO:0006265
Mal2g1478 933 MobiDBLite consensus disorder prediction 750 774 - -
Mal2g1478 933 MobiDBLite consensus disorder prediction 863 905 - -
Mal2g1478 933 SMART topIaneu2 292 552 IPR003602 GO:0003677|GO:0003916|GO:0006265
Mal2g1478 933 SMART toprim5 7 142 IPR006171 -
Mal2g1478 933 MobiDBLite consensus disorder prediction 789 813 - -
Mal2g1478 933 Pfam DNA topoisomerase 173 589 IPR013497 GO:0003677|GO:0003916|GO:0006265
Mal2g1478 933 SUPERFAMILY Retrovirus zinc finger-like domains 765 803 IPR036875 GO:0003676|GO:0008270
Mal2g1478 933 SMART c2hcfinal6 914 930 IPR001878 GO:0003676|GO:0008270
Mal2g1478 933 SMART c2hcfinal6 780 796 IPR001878 GO:0003676|GO:0008270
Mal2g1478 933 PRINTS Prokaryotic DNA topoisomerase I signature 116 129 IPR013497 GO:0003677|GO:0003916|GO:0006265
Mal2g1478 933 PRINTS Prokaryotic DNA topoisomerase I signature 514 528 IPR013497 GO:0003677|GO:0003916|GO:0006265
Mal2g1478 933 PRINTS Prokaryotic DNA topoisomerase I signature 334 343 IPR013497 GO:0003677|GO:0003916|GO:0006265
Mal2g1478 933 PRINTS Prokaryotic DNA topoisomerase I signature 216 234 IPR013497 GO:0003677|GO:0003916|GO:0006265
Mal2g1478 933 PRINTS Prokaryotic DNA topoisomerase I signature 416 432 IPR013497 GO:0003677|GO:0003916|GO:0006265
Mal2g1478 933 ProSitePatterns Prokaryotic DNA topoisomerase I active site. 329 343 IPR023406 GO:0003917
Mal2g1478 933 Gene3D Topoisomerase I, domain 2 176 600 IPR013824 -
Mal2g1478 933 Gene3D Topoisomerase I, domain 3 240 498 IPR013825 -
Mal2g1478 933 PANTHER DNA TOPOISOMERASE 3-ALPHA 7 704 - -
Mal2g1478 933 Pfam Toprim domain 9 153 IPR006171 -
Mal2g1478 933 SUPERFAMILY Prokaryotic type I DNA topoisomerase 8 599 IPR023405 -
Mal2g1478 933 CDD TOP1Ac 173 600 IPR013497 GO:0003677|GO:0003916|GO:0006265
Mal2g1478 933 MobiDBLite consensus disorder prediction 741 774 - -
Mal2g1478 933 PANTHER PROKARYOTIC DNA TOPOISOMERASE 7 704 IPR000380 GO:0003677|GO:0003917|GO:0006265
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1478 Mal-Chr2 17661258 17675867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1478 K03165 - jre:109018851 1501.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1478 2 17661258 17675867 Mal2g1478 2 17661258 17675867 ECH