Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1446 ATGTGGCACCGTTTATCATCAACGAAACTCAACCTCAGAACTTGTCGTTTAGGGTTAGGGTTTCTTACACGATCGTTCTCCTCGGAACCGGGAAAGAGATTCGCTGCGTTGTGGGGAAACGGCGATTACGGTAGATTGGGTCTCGGTAATTTGAATTCTCAATGGACACCTGCTATTTGCACCTCCTTCCATAATCAAAACATCGAAGCCATTGCTTGTGGTGGTGCTCACACCCTTTTCTTAACAGAGAATGGATGTGTTTATGCTACTGGTCTCAACGATTTTGGACAGCTTGGTATATCGGAGAGTAAACCCTACTCACTTGTGCCACTTCAAGTTTTTGGTCATGACAAGAAAGTTGTGCAGATCTCGGCTGGTTATAATCATTCCAGTGCAATAACGGTGGATGGAGAACTATATATGTGGGGAAAGAATACAAATGGGCAGCTTGGTCTTGGGAAAAGGGCTCCCAACATAGTTCCTTTGCCAACTAAAGTGGAATACTTGGATGGAATCTCAATTAAAATGGCAGCTCTAGGTTCTGAGCACTCAGTGGCTATTAGCGATGGAGGAGAGGCCTATAGTTGGGGATTGGGAGCATCTGGTAGACTTGGTCATGGCCATGAGTCAAGCATACTAGGCTTCTTCAAAAGTCACAGTGAATACACCCCAAGGCTTATAAAGGATCTTGAAGGAATCAAGGTAAAATATGTAGCTGCTGGAATGCTGACCTCTGCTTGTACTGACGAAAATGGTTGTGTCTTTATATTTGGAGAGAAAGGGATTGACAAATTGCTCTTGAAGGGGATGAGCAATGCAACAAAACCATCTTTGATCAGTGAACTTCCATACGCTGAAGAAGTTGCTTGTGGTGGCTATCATACCTGTGTCTTGACAAATTCTGGTGAGCTTTATACTTGGGGTTCAAATGAAAATGGCTGCCTTGGCATAGGATCCTCATATGCCATTCATCTACCTGAAAAGGTTCAAGGGCCATTCTTGGAGTCTTCTGTTGTTCAGGTTTCTTGTGGTTGGAAGCATACAGCAGCCATTTCTGGGGCAAGAGTCTTCACATGGGGTTGGGGAGGTTCTAATGGAACTTTCTCTGATGATGGGTATTCTTCAGGTGGACAATTGGGTCATGGAAGTGACGTGGATTGTATAAATCCTAAAAGAGTTTCCTTTGCAGAAGACGTGAAAGCATTGCAAGTTTCATGTGGTTTCAATCATACAGGTGCTATATTTGAGTATGCATAG 1257 0.4375 MWHRLSSTKLNLRTCRLGLGFLTRSFSSEPGKRFAALWGNGDYGRLGLGNLNSQWTPAICTSFHNQNIEAIACGGAHTLFLTENGCVYATGLNDFGQLGISESKPYSLVPLQVFGHDKKVVQISAGYNHSSAITVDGELYMWGKNTNGQLGLGKRAPNIVPLPTKVEYLDGISIKMAALGSEHSVAISDGGEAYSWGLGASGRLGHGHESSILGFFKSHSEYTPRLIKDLEGIKVKYVAAGMLTSACTDENGCVFIFGEKGIDKLLLKGMSNATKPSLISELPYAEEVACGGYHTCVLTNSGELYTWGSNENGCLGIGSSYAIHLPEKVQGPFLESSVVQVSCGWKHTAAISGARVFTWGWGGSNGTFSDDGYSSGGQLGHGSDVDCINPKRVSFAEDVKALQVSCGFNHTGAIFEYA* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1446 418 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 354 417 IPR000408 -
Mal2g1446 418 PANTHER UBIQUITIN-PROTEIN LIGASE E3A-RELATED 31 418 - -
Mal2g1446 418 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 85 136 IPR000408 -
Mal2g1446 418 PRINTS Chromosome condensation regulator RCC1 signature 137 153 IPR000408 -
Mal2g1446 418 PRINTS Chromosome condensation regulator RCC1 signature 87 103 IPR000408 -
Mal2g1446 418 PRINTS Chromosome condensation regulator RCC1 signature 349 370 IPR000408 -
Mal2g1446 418 PRINTS Chromosome condensation regulator RCC1 signature 177 193 IPR000408 -
Mal2g1446 418 PRINTS Chromosome condensation regulator RCC1 signature 193 207 IPR000408 -
Mal2g1446 418 PRINTS Chromosome condensation regulator RCC1 signature 34 50 IPR000408 -
Mal2g1446 418 PRINTS Chromosome condensation regulator RCC1 signature 68 81 IPR000408 -
Mal2g1446 418 PRINTS Chromosome condensation regulator RCC1 signature 291 309 IPR000408 -
Mal2g1446 418 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 252 301 IPR000408 -
Mal2g1446 418 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 137 190 IPR000408 -
Mal2g1446 418 SUPERFAMILY RCC1/BLIP-II 372 414 IPR009091 -
Mal2g1446 418 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 33 84 IPR000408 -
Mal2g1446 418 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 191 251 IPR000408 -
Mal2g1446 418 Gene3D - 31 158 IPR009091 -
Mal2g1446 418 Gene3D - 159 417 IPR009091 -
Mal2g1446 418 Pfam Regulator of chromosome condensation (RCC1) repeat 136 187 IPR000408 -
Mal2g1446 418 Pfam Regulator of chromosome condensation (RCC1) repeat 372 414 IPR000408 -
Mal2g1446 418 Pfam Regulator of chromosome condensation (RCC1) repeat 301 351 IPR000408 -
Mal2g1446 418 Pfam Regulator of chromosome condensation (RCC1) repeat 84 133 IPR000408 -
Mal2g1446 418 Pfam Regulator of chromosome condensation (RCC1) repeat 191 241 IPR000408 -
Mal2g1446 418 Pfam Regulator of chromosome condensation (RCC1) repeat 38 81 IPR000408 -
Mal2g1446 418 SUPERFAMILY RCC1/BLIP-II 37 331 IPR009091 -
Mal2g1446 418 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 302 354 IPR000408 -
Mal2g1446 418 PANTHER OS11G0545800 PROTEIN 31 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1446 Mal-Chr2 17370278 17381659 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1446 - - gmx:100811823 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1446 2 17370278 17381659 Mal2g1446 2 17370278 17381659 ECH