Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1442 ATGTTCATGGCTACACAAAATTGTTCAAAATGTGTCATGTTGGTGACACTACTAGTAACAATTCTCTTTGTTCATCCAACATCCTCAACATCAAGAGGGTCTCTCAACCATCACCAAATTTCTCCAGGCGGGTTCCGAATCACTCTTCGACACGTTGATTCGGGGAAAAACTTGACCAAATTCGAGCGTGTTCAACATGGCATCAACCGTGGACATAGCCGACTCCAAAGACTAAAAGCAATGGTGTTAGCATCGTCAACAACTGAAGGTTCATCTCAATTGGAAGCACCGGTTCACGCCGGAAACGGCGAATATCTAATGGAACTATCCATTGGAACACCACCAATTTCTTACCCTGCAATTTTGGACACAGGAAGTGATCTAATATGGACTCAATGTGAGCCTTGTTCACAATGTTACAAACAACCTACACCAATTTTTGATCCAAAAAAATCCTCAACTTTTTCTCAACTCTCATGTAGTAGCGACCTATGCAATGCTTTACCTTCCTTAAATTGCATAAAAAATGGTTGCAATTATGTTTATTCATATGGTGATTATTCTGTGACACAAGGTGTTTTAGGTAGTGAAACATTCACTTTTGGTGAGGATAAAAAAAAACAAGTTTCAGTTAAAAACATTGGTTTTGGTTGTGGTGAAGACAATGAAGGACAAGGTTTTACACAAGCTTCAGGGTTGGTCGGATTAGGACGTGGTCCTTTATCTTTGGTTTCTCAATTAAAAGAACAAAAATTCTCTTATTGTTTAACTTCAATGGATGACACAAAAGAAAGTGTTCTTTTGTTAGGTTCTTTTGCAAATGTTAATGCCACAAAACAGGTAACAACACCACTTATTACAAATCCATCACAACCATCTTTTTATTATGTTGCACTTGAAGGAATCTCTGTTGGTGACACAAAATTATCAATTGAGAAATCAACTTTTGAGGTTAGTGATGATGGAAGTGGTGGTGTAATTATTGATTCTGGCACAACAATTACTTACATTGAAGAGAATGCTTTTGATTCACTCAAAAAAGAGTTTATAGGTCAAACAAATTTACCGGTCGATAAATCGGGTTCGACCGGATTAGATCTTTGTTTTAGTTTACCATCAGGGAAAACACAAGTTGAAATTCCAAAATTGATCTTTCATTTCAAAGGTGGTGATTTGGAATTGCCTGGTGAAAATTATATGATTGCTGATTCAAGTTTAGGTGTTGTTTGTTTAGCTATGGGAGCTTCAAATGGAATGTCTATCTTTGGTAATATTCAACAACAGAATATTTTGGTTAATCATGATCTTCAGAAGGAAACTATTACTTTTGTTCCTACTCAATGTAATAAGTTGTGA 1356 0.3636 MFMATQNCSKCVMLVTLLVTILFVHPTSSTSRGSLNHHQISPGGFRITLRHVDSGKNLTKFERVQHGINRGHSRLQRLKAMVLASSTTEGSSQLEAPVHAGNGEYLMELSIGTPPISYPAILDTGSDLIWTQCEPCSQCYKQPTPIFDPKKSSTFSQLSCSSDLCNALPSLNCIKNGCNYVYSYGDYSVTQGVLGSETFTFGEDKKKQVSVKNIGFGCGEDNEGQGFTQASGLVGLGRGPLSLVSQLKEQKFSYCLTSMDDTKESVLLLGSFANVNATKQVTTPLITNPSQPSFYYVALEGISVGDTKLSIEKSTFEVSDDGSGGVIIDSGTTITYIEENAFDSLKKEFIGQTNLPVDKSGSTGLDLCFSLPSGKTQVEIPKLIFHFKGGDLELPGENYMIADSSLGVVCLAMGASNGMSIFGNIQQQNILVNHDLQKETITFVPTQCNKL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1442 451 CDD pepsin_A_like_plant 104 448 IPR034161 -
Mal2g1442 451 Pfam Xylanase inhibitor C-terminal 295 444 IPR032799 -
Mal2g1442 451 PANTHER OS07G0603500 PROTEIN-RELATED 17 450 - -
Mal2g1442 451 ProSiteProfiles Peptidase family A1 domain profile. 105 444 IPR033121 -
Mal2g1442 451 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 326 337 IPR001969 GO:0004190|GO:0006508
Mal2g1442 451 SUPERFAMILY Acid proteases 98 448 IPR021109 -
Mal2g1442 451 Pfam Xylanase inhibitor N-terminal 105 271 IPR032861 -
Mal2g1442 451 Gene3D Acid Proteases 83 270 IPR021109 -
Mal2g1442 451 PANTHER OS08G0469000 PROTEIN 17 450 - -
Mal2g1442 451 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 120 131 IPR001969 GO:0004190|GO:0006508
Mal2g1442 451 Gene3D Acid Proteases 273 450 IPR021109 -
Mal2g1442 451 PRINTS Pepsin (A1) aspartic protease family signature 111 131 IPR001461 GO:0004190|GO:0006508
Mal2g1442 451 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1442 Mal-Chr2 17264694 17266049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1442 103 451 Miscellaneous Gene Families AT1G77480 30.130 9.39e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1442 - - gmx:100811294 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1442 2 17264694 17266049 Mal2g1442 2 17264694 17266049 ECH