Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1434 ATGGCAGCTGAGTTAGTCATTGCTGCAACAAGCGAGAAATTGGCCGAAACTGATTGGGCAAAAAATATTGAAATATGTGAGTTGGTTGCCCGTGATAAAAGACAAGCCAGAGATGTTGTTAAAGCTATCAAGAAGAGACTCAGTAGCAAACACCCCGACGCTCAACTTTATGCTGTCACGTTGCTGGAGATGTTGATGAACAATATTGGAGAGCATATTCATGAGCAAGTGATTGATATCGGAATTATTCCTATTCTTGTGAAAATTGTGAAGAAAAAGTCTGATTTGCCTGTGAGGGAGAGGATATTTCTCCTACTAGATGCCACACAATCATCCCTTGGTGGCGCTTCTGGAAAATTTCCTCAGTATTATAATGCATATTATGATTTGGTGAATGCTGGAGTGCAGTTTCCTCAAAGTGCTCAAGTGGTCCAATCAAATAATGTTAGTTCACAACCTAGTAGGACTGGTAATGTACCAAACAGGGAGCAGGCCTCACCTAGACATGAAGTGGCTGTACCGCAAGCAGAGTCCCAGACAGTCCCTGAATCTAGCATCATTCAAAAAGCTGGTAATGCATTGGAAGTTTTAAAAGAAGTCCTCGACGCTGTTGATGCTCAACATCCTCAGGGAGCAAGCGATGAATTTACCCTTGACCTTGTAGAGCAATGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGTCTTCTCGAGACGAGAGGATAGTTTCTCGAGCAATTGAATTGAACGAACAGCTTCAGAAAGTTCTTGCAAGACATGATGACCTTGTTTCTGGAAGAGCTACAAAAGCTGCTAATGAACATGTTCCGAAAGTTCTACCAAGACGCAATGTCGTTGTATCTAGCAGAGCTACAACAATTGCTAATGAACAGTTTCCGAAAGTTCAACCCAGACACGATGACGTTGTATTTGGAAGAGCTACAACAACTGCTAACGAAGAGTTTCCAAAAGTTCTTCCAAGACGCAATGACATTGTATCTGGCAGAGCTACAACAACTGCTATTACTCGTTTTGACCAGGACGAATCGGAGGAGGAAGAGGAGCCTGAACAGTTAGTGCGAAGATTACGCAAAGGAAAGGCTTGTGCAAGGCCTGAAGACGAAGAAACTGAAACCAACATCTCTCGCATGCGTTTGAATGGGGAGAGACTCAATCGTCCTTTAATACGTCCACTGTCCTCAGAGCCATCTCGAGAAGTTCACAGTCCTGTTCCTCCACCGGCTGCAATCCCACCTCCACGCCCGAAACAGAATGGAGAGCTTCCTCACGTTGCAATTCCACCGCCACCTGCAAAACACGTTGAGAGGGAGAGATTTTTTCAGGAAAACAAGGATGCTTCTAATCTGTCTGGTCACATGAGAGGTCTCTCTTTACATAGTCGCAATGGTAGCAGCTCTCACAGTCACAGTGGAAGCTTTGATTTTAGCGACTGA 1458 0.441 MAAELVIAATSEKLAETDWAKNIEICELVARDKRQARDVVKAIKKRLSSKHPDAQLYAVTLLEMLMNNIGEHIHEQVIDIGIIPILVKIVKKKSDLPVRERIFLLLDATQSSLGGASGKFPQYYNAYYDLVNAGVQFPQSAQVVQSNNVSSQPSRTGNVPNREQASPRHEVAVPQAESQTVPESSIIQKAGNALEVLKEVLDAVDAQHPQGASDEFTLDLVEQCSFQKQRVMHLVMSSRDERIVSRAIELNEQLQKVLARHDDLVSGRATKAANEHVPKVLPRRNVVVSSRATTIANEQFPKVQPRHDDVVFGRATTTANEEFPKVLPRRNDIVSGRATTTAITRFDQDESEEEEEPEQLVRRLRKGKACARPEDEETETNISRMRLNGERLNRPLIRPLSSEPSREVHSPVPPPAAIPPPRPKQNGELPHVAIPPPPAKHVERERFFQENKDASNLSGHMRGLSLHSRNGSSSHSHSGSFDFSD* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1434 485 SUPERFAMILY GAT-like domain 153 268 - -
Mal2g1434 485 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Mal2g1434 485 Gene3D - 2 136 IPR008942 -
Mal2g1434 485 MobiDBLite consensus disorder prediction 144 163 - -
Mal2g1434 485 MobiDBLite consensus disorder prediction 346 485 - -
Mal2g1434 485 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Mal2g1434 485 MobiDBLite consensus disorder prediction 144 168 - -
Mal2g1434 485 Pfam VHS domain 6 109 IPR002014 GO:0035091|GO:0043130
Mal2g1434 485 PANTHER TOM1-LIKE PROTEIN 1 275 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mal2g1434 485 PANTHER TOM1-LIKE PROTEIN 320 485 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mal2g1434 485 Gene3D - 176 274 IPR038425 -
Mal2g1434 485 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 275 - -
Mal2g1434 485 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 320 485 - -
Mal2g1434 485 CDD VHS 2 130 - -
Mal2g1434 485 MobiDBLite consensus disorder prediction 357 384 - -
Mal2g1434 485 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Mal2g1434 485 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
Mal2g1434 485 MobiDBLite consensus disorder prediction 452 485 - -
Mal2g1434 485 Pfam GAT domain 194 267 IPR004152 GO:0035091|GO:0043130
Mal2g1434 485 MobiDBLite consensus disorder prediction 408 437 - -
Mal2g1434 485 CDD GAT_GGA_like_plant 186 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1434 Mal-Chr2 17186972 17191332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1434 - - mtr:MTR_3g097280 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1434 2 17186972 17191332 Mal2g1434 2 17186972 17191332 ECH
Mal7g4811 7 116523433 116527968 Mal2g1434 2 17186972 17191332 PCT