Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1378 ATGGAAGAACAAGAAGATAACGAAATCACGAGCAAGGAAGAACAAGAAGAAGCATTAGTCGCTTTGATCGAACATCGAACCCGTGAAGTTAACAATCTCCGTCAGCGTCTCGCCTATACAAAAAACCAGCTTGATGAAGCGGAAAAGAGGTTAAAAGATTCAGAATCAAAATTGGCTCGTCTTCGAGGTCATACAACTAAAACAGTTCAATCTACAACTAAAAAAATAACTAACTCAGATGATGAAAATGGAACTGTGGCTGTGAAGAAAGAGCGTAGATCGAATAGTCCTATTGATAGGAATGAACGTTCTTATAAAAATAACAAGCAATCTAAAACTGAACTTGTTATTCCTGCTGTTACACCCAAGATTTCGCGGTCTTCAGGAAAAGGTTCTGGTTCTGAAGTAACTGCTTCGCCGGTTCATACTTCTTTGGTTACTGGAGGCAAATCGGATAAGTTGAAAAGAGAGCAGCAAAATGTTGAAGGGAAGGATAAAGGGACAAAAAGAAAATTTGAACAAAAAGAGCACCAGGAGTTGATTCCTTTAATACGCAAGAGTTCATTTGAGAAATTAGTACACTGCCAATCAAGCAACCACATCTCAAGTCAGCACAAGAGGAAATTGCGGAGTATTGCTTTGTGTCCTGCGAATGATCAACTTTTTGCCACCAGTGCTTTGGATGGATTGGTCAACTTCTGGCAAGTCCAAGCTAGAGGATCATCAGCCTCTCTGCTTAACTCTACTGATTGTGCGTCCCAAAAACAGAGGAGATGGCCAGAAGATATAGCTTGGCACCCGGAAGGAAACAGGCTCTTTTCAGTATATACCGCTGATGGTGGAGACTCCCAAGTATCAATTACAAATTGGAATAAAATAAAAGGGGTAGAACGTGTGAAATTCTTAGAGGACAAGCCCCATTTTAAGGGAATTATCAATGGCATTGTTTTTTTGCCCTGGGAAGACACATGTTTTGTAACTGGTGGAAGTGACCATGCTGTTGTACTTTGGCGTGAGCAGGATGGCGAGGACAAATGGAAGCCAAGACCATTGCACCGGAATCTTCATTCTTCGGCTGTCATGGGTGTTGCTGGTATGCAGCAGAAGCAGATTGTGTTATCTGCAGGTGCAGACAGGAGGATATTTGGGTATGATGTTGGTGCAGGAAGAGCAGATTTCAGTCATCAGATTGATAGTAAATGCATGAGTGTAATTCCCAATCCAGTCGACTTCAACTTGTTTATGGTTCAAACAGGGACTCATGAGAAGCAACTTCGATTATTTGATATTAGATTGAGGCGGACAGAACTTCACGCTTTTGGGTGGAAACAAGAAAGCAGTGAATCTCAATCAGCTCTGATTAATCAGGCTTGGTCTCCGGATGGTCTTTATATAACGTCTGGTTCAGCGGATCCTGTGATTCACATATTTGATATAAGATATAATGTTAACAAACCTTCCCAATCTATAAGAGCTCACCAGAAACGGGTCTTTGGAGCCCTATGGCTTCAGTCTATTCCTCTTCTCATATCCATATCATCTGATCTCAACATTGGGTTGCACACCCTGATGAAGTAA 1578 0.4157 MEEQEDNEITSKEEQEEALVALIEHRTREVNNLRQRLAYTKNQLDEAEKRLKDSESKLARLRGHTTKTVQSTTKKITNSDDENGTVAVKKERRSNSPIDRNERSYKNNKQSKTELVIPAVTPKISRSSGKGSGSEVTASPVHTSLVTGGKSDKLKREQQNVEGKDKGTKRKFEQKEHQELIPLIRKSSFEKLVHCQSSNHISSQHKRKLRSIALCPANDQLFATSALDGLVNFWQVQARGSSASLLNSTDCASQKQRRWPEDIAWHPEGNRLFSVYTADGGDSQVSITNWNKIKGVERVKFLEDKPHFKGIINGIVFLPWEDTCFVTGGSDHAVVLWREQDGEDKWKPRPLHRNLHSSAVMGVAGMQQKQIVLSAGADRRIFGYDVGAGRADFSHQIDSKCMSVIPNPVDFNLFMVQTGTHEKQLRLFDIRLRRTELHAFGWKQESSESQSALINQAWSPDGLYITSGSADPVIHIFDIRYNVNKPSQSIRAHQKRVFGALWLQSIPLLISISSDLNIGLHTLMK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1378 525 Pfam WD domain, G-beta repeat 455 478 IPR001680 GO:0005515
Mal2g1378 525 SMART WD40_4 347 385 IPR001680 GO:0005515
Mal2g1378 525 SMART WD40_4 441 478 IPR001680 GO:0005515
Mal2g1378 525 SMART WD40_4 295 338 IPR001680 GO:0005515
Mal2g1378 525 SMART WD40_4 483 522 IPR001680 GO:0005515
Mal2g1378 525 SMART WD40_4 196 235 IPR001680 GO:0005515
Mal2g1378 525 MobiDBLite consensus disorder prediction 55 174 - -
Mal2g1378 525 Gene3D - 407 525 IPR015943 GO:0005515
Mal2g1378 525 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 3 523 - -
Mal2g1378 525 MobiDBLite consensus disorder prediction 63 83 - -
Mal2g1378 525 Gene3D - 190 400 IPR015943 GO:0005515
Mal2g1378 525 SUPERFAMILY WD40 repeat-like 207 519 IPR036322 GO:0005515
Mal2g1378 525 Coils Coil 30 64 - -
Mal2g1378 525 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 3 523 - -
Mal2g1378 525 MobiDBLite consensus disorder prediction 149 174 - -
Mal2g1378 525 ProSiteProfiles Trp-Asp (WD) repeats profile. 202 244 IPR001680 GO:0005515
Mal2g1378 525 MobiDBLite consensus disorder prediction 84 109 - -
Mal2g1378 525 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1378 Mal-Chr2 16568813 16573836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1378 - - gmx:100799587 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1378 2 16568813 16573836 Mal2g1378 2 16568813 16573836 ECH