Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1351 ATGGTGAACGCAGCCGGTACCGGAGACGATGATGAAGAGTTTGGGACCGGAGGAGGAAGACAGCAGGGGAGCGGTGGTGGTAGAGGTGGAGAGATCGAACGGAAGAGAGAGAAGGACATGGCGAGATCCGACATCAAGGCCGTCAGATATGAGGATGGGGAGCGGCAGAGGTGGACGGCAGGTTGGAGTAAAAGAGGAGAGGGAAATCTGAACTTCAATGGAGAAAAAGGTTTGCCAGAGGAGGAAGGAGAATGGGCATCAAGTGCGCGAGAAGGTTGGAGAGTGAGAATAGAAACACTCTTTTGGTTGGGCTTGAAAAGACCAACCTGGCCCATCTGGAAACGAATTTTCACATATTTGCCAAAACGACGTCGTGAATGTGTCGTTTTCAGAGACACTACCTTCCAAGTTTTGGCAATCTTTGTTGGCGCGTTAAAGATGATGAAGAGGAAGAGAGAAGAGAAAGAGTGTATGGATATCGTGTGGCAAACTCCAGCAAATCCTCCATTACCGCAAGACTATATTGTTCGAAATGGGATTCGATTTGTTAGACCATACTACTTCGAATTCATCGCTCACGTAAAAAATCGATGGGCGGGGAAAACCATTGTTGATTTGTTCGCCGAGGAATTTAAAGGCCGACCTTATGATTATTATGTTAGTGCAGTGAAATGTGGAAGGATTCAAGTTGATGGTGAAATGGTACCGGTTTCATATGTAGTTAAATCGTCTCAAAAGATAAGCCATTTTGTACACAGGCATGAACCACCTGTGATGGCTTGCAATGTTCCTATTCTTCATACAGAACCAGATGTGTTAACAGTTTGTAAGCCGGCATCTGTCCCTGTTCATCCATGTGGTCAATATCGCAAGAACACTGTTGTTGGCATCCTTCAAGCAGAATATGGGCTGGCGCCTCTGTTTCCTATCCATCGACTGGATCGCCTTGTCTCTGGACTCCTTATTATGGCCAGAAATGCTACAAAAGCTGACAGTTTTAGGCAAGAGATTGAGGCTGGCTTAGTCAAGAAACAATATATTGCAAAAGTAGTTGGAGAATTTCCCGAGGATGAGCTAATTGTTGATGCCAATATAGACTATAATGCTCGAGAAGGAAGAAGCACAGCAGAGGTCAGCGACTCTACAAAGGGGAAGGTTGCCTCCACAAAATTTACCCGGATTAGTAGCAATGGTACTCATAGTATTGTTTTATGCGAACCAGTCACTGGCCGCACTCATCAGATACGTGTTCACTTACAGTCTTCTGGACACCCAATAGCCAATGACATGCTGTACATCTCAGAGCGGACTGTTGATCGATCTATTAATGGGTCAACTGCTGATAGATCAGCTCGCATATCTGATGCTTCCTTGACATCAGGCGAAAAAGTGCCCAATGATTATCAAGAAATTTCCAATGAGGATTTTAGCATTGATCCTATGTGTACAAACTGTCCAAATTTGGCACCGAAGGGATATGATGGTGATGAAGAAGGTTTGTGGTTACATTGTATGCGGTACTCTGGAACTGGATGGACATATGAATGCCCATATCCTGATTGGGCGAAACTTTAG 1575 0.4489 MVNAAGTGDDDEEFGTGGGRQQGSGGGRGGEIERKREKDMARSDIKAVRYEDGERQRWTAGWSKRGEGNLNFNGEKGLPEEEGEWASSAREGWRVRIETLFWLGLKRPTWPIWKRIFTYLPKRRRECVVFRDTTFQVLAIFVGALKMMKRKREEKECMDIVWQTPANPPLPQDYIVRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYDYYVSAVKCGRIQVDGEMVPVSYVVKSSQKISHFVHRHEPPVMACNVPILHTEPDVLTVCKPASVPVHPCGQYRKNTVVGILQAEYGLAPLFPIHRLDRLVSGLLIMARNATKADSFRQEIEAGLVKKQYIAKVVGEFPEDELIVDANIDYNAREGRSTAEVSDSTKGKVASTKFTRISSNGTHSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYISERTVDRSINGSTADRSARISDASLTSGEKVPNDYQEISNEDFSIDPMCTNCPNLAPKGYDGDEEGLWLHCMRYSGTGWTYECPYPDWAKL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1351 524 TIGRFAM rluA_subfam: pseudouridine synthase, RluA family 197 445 IPR006225 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Mal2g1351 524 ProSitePatterns Rlu family of pseudouridine synthase signature. 310 324 IPR006224 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Mal2g1351 524 SUPERFAMILY Pseudouridine synthase 255 522 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Mal2g1351 524 Pfam RNA pseudouridylate synthase 272 420 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Mal2g1351 524 MobiDBLite consensus disorder prediction 1 41 - -
Mal2g1351 524 PANTHER PSEUDOURIDINE SYNTHASE 158 524 - -
Mal2g1351 524 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 158 524 - -
Mal2g1351 524 CDD PseudoU_synth_ScRIB2 248 523 - -
Mal2g1351 524 Gene3D Pseudouridine synthase 256 507 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1351 K15454 - gmx:100811500 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1351 2 16223213 16237544 Mal2g1351 2 16223213 16237544 ECH