Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1346 ATGGAAGGCTCAAAAGACCCAAATTCAAACCCGGGTCGGATCGACGATCCAGATTCAGAACTCGAACTCTACACCATCCCAAGCTCTTCCAGATGGTTCGCGTGGGACGAAATTCACGAAACAGAGAAAAAAGCATTCAAAGAGTATTTCGATGCAACCTCAATAACACGAACACCGAAAATCTACAAAGAGTACAGAGACTTCATCATCAACAAGTATCGCGAAGAACCTTCTAGAAGACTCACGTTCACCGAAGTACGAAAATCACTCGTCGGTGACGTCACGTTCTTGAACAAGGTTTTCGTTTTCTTGGAGCGTTGGGGTTTGATTAACTACGGTGCGCGTTCTGGTGGTGACGGTGGGGAAGCGGAGAAGGAACATGAGGAGGAGAGGTGTAAGTTGAAGGTTGAGGAAGGTGCTCCTAATGGGATTCGTGTTGTTGCTACGCCGAATTCGTTGAAACCAATTGTGTTGCCTCGGGATACGAAGATTGGTGGTGATGGGAGTGGGATTGGTGCTAAAATGCCACCGTTGGCGTCATATTCGGATGTTTATGGTGATTTGATTCGACGGAAAGAGGTTAATTGTGGGAATTGTGGTGATAAATGTGGTTCTGGAAACTATAAAAGTACAAAGGATACTTTCATTATTTGCACGAAATGTTTCAAAAACGGGAATTATGGGGAGAAAAGGTCCATGGAGGATTTCATATTAAACGAGTCAAGTGAAATTAGTGCCAACCACAGTGCTGTCTGGACTGAGGGAGAAACTCTTCTTCTTTTAGAATCTGTTTTGAAGCATGGGGATGACTGGGACCTTGTTGTTCAAAGTGTTCGAACCAAGACTAAACTTGAATGTATTTCCAAACTCATTGAGCTGCCCTTTGGGGAGCTCATGTTAGGCTCTGCTCACAGAAATGATAACAGTAATTGCGTTACTGGCATCGTGAACAACGGAAACCAAGTTCAGTCATCTTCGTCCGATCACCAAGAAACTTCAATGACACATGATCAATCTTCTGAGCCTAAAAATGAAGTTGAGCAGAATGGAGATGCTGTGAATGAAAGTCCTTCAAAAAGGCAGCGGGTTGCTGCACTTTCAGATTCCAGCAGTTCACTTATGAAGCAGGTGGGACTGCTCTCTACTGTGGTTGACCCTCATATCACAGCTGCTGCAGCTGCTGCTGCTATTACAGCACTCTGTGATGAGAATTCGCTCCCTAGGGAGATATTTGATGTTGAAGAGGATAATGCTTCAGCAAGGGCTCTCAAGGGTGAAGGTTTAGAGATGGTGGAGGGATCCACTCAATCAGAAGTAAAAGATGACATACCATTGACACTACGCGTAAGAGCTGCCATTGGAACCGCTCTTGGAGCTACTGCTGCTCGAGCAAAGTTGTTGGCGGACCAAGAAGACAGAGAGATTGAACATTTAGTAGCAACTATAATTGAAGCCCAGATTGAGAAGTTGCAACAGAAGGTTAAACATTTTGATGAATTGGAGCTTTTGATGGAAAAGGAACATGCTGAAACGGAAGAGCTGAAAGATTCTATCTTGACTGAACGGATTGATGTGTTGCGGAAGACATTTAAATCTGGTGTCGCTAGATGGAAACATTATCCTTCCCTGAAATCTTAG 1638 0.4414 MEGSKDPNSNPGRIDDPDSELELYTIPSSSRWFAWDEIHETEKKAFKEYFDATSITRTPKIYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTFLNKVFVFLERWGLINYGARSGGDGGEAEKEHEEERCKLKVEEGAPNGIRVVATPNSLKPIVLPRDTKIGGDGSGIGAKMPPLASYSDVYGDLIRRKEVNCGNCGDKCGSGNYKSTKDTFIICTKCFKNGNYGEKRSMEDFILNESSEISANHSAVWTEGETLLLLESVLKHGDDWDLVVQSVRTKTKLECISKLIELPFGELMLGSAHRNDNSNCVTGIVNNGNQVQSSSSDHQETSMTHDQSSEPKNEVEQNGDAVNESPSKRQRVAALSDSSSSLMKQVGLLSTVVDPHITAAAAAAAITALCDENSLPREIFDVEEDNASARALKGEGLEMVEGSTQSEVKDDIPLTLRVRAAIGTALGATAARAKLLADQEDREIEHLVATIIEAQIEKLQQKVKHFDELELLMEKEHAETEELKDSILTERIDVLRKTFKSGVARWKHYPSLKS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1346 545 CDD SANT 252 289 IPR001005 -
Mal2g1346 545 SMART sant 248 296 IPR001005 -
Mal2g1346 545 ProSiteProfiles SANT domain profile. 247 298 IPR017884 -
Mal2g1346 545 MobiDBLite consensus disorder prediction 317 333 - -
Mal2g1346 545 Gene3D - 248 296 - -
Mal2g1346 545 SUPERFAMILY Homeodomain-like 249 304 IPR009057 -
Mal2g1346 545 ProSiteProfiles SWIRM domain profile. 24 121 IPR007526 GO:0005515
Mal2g1346 545 Gene3D - 30 116 IPR036388 -
Mal2g1346 545 Coils Coil 480 517 - -
Mal2g1346 545 MobiDBLite consensus disorder prediction 317 367 - -
Mal2g1346 545 MobiDBLite consensus disorder prediction 345 367 - -
Mal2g1346 545 PANTHER SWI/SNF COMPLEX-RELATED 23 536 - -
Mal2g1346 545 Pfam SWIRM-associated region 1 455 531 IPR032451 -
Mal2g1346 545 SUPERFAMILY Homeodomain-like 30 113 IPR009057 -
Mal2g1346 545 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 23 536 - -
Mal2g1346 545 Pfam Myb-like DNA-binding domain 252 290 IPR001005 -
Mal2g1346 545 Pfam SWIRM domain 27 112 IPR007526 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1346 Mal-Chr2 16163906 16168818 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1346 K11649 - gmx:100790238 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1346 2 16163906 16168818 Mal2g1346 2 16163906 16168818 ECH