Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1279 ATGGAGATCACAGAGAAACAAGCAATGATCCGCGACATCGGTTTACAAGTCATCATGATCCTCGCAATGGCTTTAATCTTCCTAAGCATGCACGGAATTCCACAGAAATTCCTCGCCAAACTCCGATTCCGAAACCGAACCGGAATCAAAGCAAAGCGTCACTTCGTCCGTGGCGCTCAGCTTCTCACACAAGCTAGATCTTCCAAAAACAAATCCAGATCCGCCATCAACAACCTCGCAAACGAAGCCTTAGCCGAGGCCGAAAAAGCGATCGAACTCGATCCAAAAGACGCCGCTTCGTATCTTCTCAAAGCAATGATTCTCGATCTTCAAGGTTTTCGAACTTCCGCTCTTGAATCACTCGACGCCGCGTTATCTCCTCTCGCCGCCGGTTCGCTTGAGCAAGGTGAACGCGGTGACGCGCTTTTCAAGAGAGCTGAGTTGAAACTGGCGACGAGTGAACGCGGACGAGTTGACTCGGCGCTTGCAGATTTAACTGAGTCTGTGATTTTGAGTCCGAAGAACGCGAAAGCTTGGTGTGCGTTGGGAGAGTGTTACGAAGGGAAGAAAATGGATGAAGAAGCGAAGAAAGCTTATAAGGAGGCTCATGAATTGGCGCCACAGTATTCTGTGCCTGTAGAAGCACTTAACAGCAGTGGAACAAAAGATAAAGAAATGTCTTGA 684 0.4854 MEITEKQAMIRDIGLQVIMILAMALIFLSMHGIPQKFLAKLRFRNRTGIKAKRHFVRGAQLLTQARSSKNKSRSAINNLANEALAEAEKAIELDPKDAASYLLKAMILDLQGFRTSALESLDAALSPLAAGSLEQGERGDALFKRAELKLATSERGRVDSALADLTESVILSPKNAKAWCALGECYEGKKMDEEAKKAYKEAHELAPQYSVPVEALNSSGTKDKEMS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1279 227 Gene3D Tetratricopeptide repeat domain 35 135 IPR011990 GO:0005515
Mal2g1279 227 Pfam Tetratricopeptide repeat 176 209 IPR013105 -
Mal2g1279 227 Gene3D Tetratricopeptide repeat domain 137 222 IPR011990 GO:0005515
Mal2g1279 227 PANTHER - 10 219 - -
Mal2g1279 227 SUPERFAMILY TPR-like 81 211 IPR011990 GO:0005515
Mal2g1279 227 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 219 - -
Mal2g1279 227 SMART tpr_5 139 175 IPR019734 GO:0005515
Mal2g1279 227 SMART tpr_5 176 209 IPR019734 GO:0005515
Mal2g1279 227 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1279 - - gmx:100783725 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1279 2 15341552 15344241 Mal2g1279 2 15341552 15344241 ECH