Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1276 ATGTCCACTACCAACGAAGATTTCCAAGGTGTTTCAAATTGTTATGTGTTCAAGAGCCGACTGCAAGAGTATGCACAGAAAGCGGGACTCAACACACCTGTGTATGAAACTACCAAAGATGGGCCTTCCCATGAACCTTCTTTCAGGTCAACAGTGATTGTGAATGATGTTCGGTATGATTCTTTGACTGGATTTTTTAACCGTAAGGCAGCCGAGCAGTCAGCTGCAGAGGTTGCTTTGATAGGGTTGGCAAAAGCTGGTGAAGTTAATCAGTCTATCACTCAGCCTGTTCATGAAACTGGATTATGCAAGAATTTACTTCAGGAATATGCACAGAAGATGAATTATGCAATGCCATTGTATCATTCCAAAAAGGACGACACACCACCAGGTAGAGCACCTTTATATTCATGTACGGTTGACATTGGAGGGATTCTCTATATTGGAGGAACAGCAAAAACAAAGAGAGAAGCAGAGATAAAAGCTGCGAGAACTGCTTTAATAGCTATCCAGACAAATGCATCCCAGGCTTCTGAAAACCAGTTTGGCCATTTGACTGTCATTCCATCCAGAAAAAGGGCAACAGATTCTGTTGCTGATGAGGCTTCGAAAGCTCCGAAGCCTAAGAAATCACGCTTTAAAGGGAAATATTCCAAGAAGAAACCGCCTAGAAATAAGAAGCGCCGTATTAACACTGACAATACTGGCGATGGAGCAAATATCAATAATGGGGTACAATCACTGGCAAATGCTAATGATGAATATGGCCTCCAAATAGCATACCCTTTGGAAGCCACGAAGAATTATGAGAACGGGGTATCGACTAATCATCATGAGAAAGAGACATTAGCTGGCATCCAGGAAATCAAATCTGAAGCAGCATTCCCTTCAGAAGCCATGAAGAACTCTGAGAACGGAGTATCAACTAATCATCATGAGAAAGAGACGTTAGCTGGCCTCCAGGAAATCAGATCTGAAATAGCATTTCCTTCAGAAGCCATGAAGAATTCTGAGAACGGAGTATCGACTAATCACCATGAGAAAGAGACATTAGCTGGCATCCAGGAAATCAAATCTGAAGCAGCATTGCCTTCAGAAGCCATGAAGAACTCTGAGAGCGATATGTCAAGTAATCAACATGAGAAAGAGACATTGGCTGGCCTCCAGGAAATCAAATCTGAAGCAGCATCCCCTTCAGAAGCCATGAAGAATTCTGAGAACGGGGTATCCACTAGTCATCATGAGAAAGAGACATTAGCCGGCATCCAGGAAATCAAATCTGAAGCAGAATTGCCTTCAGAAGCCATGAAGAATTCTGAGAACGATATGTCAACTAATCATCATGAGAAAGAGACATTGGCTGGCCTCCAGGAAATCAAATCTGAAGCAGCATTGCCTTCAGAAGCCATGAAGAACTCTGAGAACGATATATCAACTAATCATCATGAGAAAGAGACATTGGCTGGTCTCCAAGAAATCAAATCTGAAGTAGCATTCCCTTCAGAAGCCATGAAGAACTCTGAAATATCAACTAATCAATATGAGAGAGAGACATTGGCTGGCCTCCAGGAAATCAAATCTGAAGCAACATTCCCTTCAGAAGCCATGATGAATTCTGAGAACGATATATCAACTAATCTTCATGAGAAAGAGATGTACCAGTCATTTGTTTTGAATAATCAAGAGAATTTTGAGAGTGGGAAGTCAACAGAATTGCAATCCAAAGAGAACAATCTTGGCAATGTTGTTACAGAAGTGTCGTTTGCACCTGAGGGATACATACTGGGGATGAGCACGGAGATGAACAAACAGAATTGTAATGGCGATATGGTCTCTGGCGAATGA 1845 0.4195 MSTTNEDFQGVSNCYVFKSRLQEYAQKAGLNTPVYETTKDGPSHEPSFRSTVIVNDVRYDSLTGFFNRKAAEQSAAEVALIGLAKAGEVNQSITQPVHETGLCKNLLQEYAQKMNYAMPLYHSKKDDTPPGRAPLYSCTVDIGGILYIGGTAKTKREAEIKAARTALIAIQTNASQASENQFGHLTVIPSRKRATDSVADEASKAPKPKKSRFKGKYSKKKPPRNKKRRINTDNTGDGANINNGVQSLANANDEYGLQIAYPLEATKNYENGVSTNHHEKETLAGIQEIKSEAAFPSEAMKNSENGVSTNHHEKETLAGLQEIRSEIAFPSEAMKNSENGVSTNHHEKETLAGIQEIKSEAALPSEAMKNSESDMSSNQHEKETLAGLQEIKSEAASPSEAMKNSENGVSTSHHEKETLAGIQEIKSEAELPSEAMKNSENDMSTNHHEKETLAGLQEIKSEAALPSEAMKNSENDISTNHHEKETLAGLQEIKSEVAFPSEAMKNSEISTNQYERETLAGLQEIKSEATFPSEAMMNSENDISTNLHEKEMYQSFVLNNQENFESGKSTELQSKENNLGNVVTEVSFAPEGYILGMSTEMNKQNCNGDMVSGE* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1276 614 CDD DSRM_AtDRB-like_rpt1 16 84 IPR044450 GO:0003725
Mal2g1276 614 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 1 1 312 IPR031147 GO:0003725
Mal2g1276 614 SMART DRBM_3 17 84 IPR014720 -
Mal2g1276 614 SMART DRBM_3 103 171 IPR014720 -
Mal2g1276 614 Pfam Double-stranded RNA binding motif 18 80 IPR014720 -
Mal2g1276 614 Pfam Double-stranded RNA binding motif 104 167 IPR014720 -
Mal2g1276 614 MobiDBLite consensus disorder prediction 194 208 - -
Mal2g1276 614 MobiDBLite consensus disorder prediction 209 227 - -
Mal2g1276 614 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 16 85 IPR014720 -
Mal2g1276 614 Gene3D - 99 172 - -
Mal2g1276 614 MobiDBLite consensus disorder prediction 187 245 - -
Mal2g1276 614 MobiDBLite consensus disorder prediction 364 383 - -
Mal2g1276 614 MobiDBLite consensus disorder prediction 369 383 - -
Mal2g1276 614 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 102 172 IPR014720 -
Mal2g1276 614 SUPERFAMILY dsRNA-binding domain-like 16 83 - -
Mal2g1276 614 MobiDBLite consensus disorder prediction 395 415 - -
Mal2g1276 614 SUPERFAMILY dsRNA-binding domain-like 104 171 - -
Mal2g1276 614 PANTHER RIBONUCLEASE III 1 312 IPR011907 GO:0003723|GO:0004525|GO:0006364
Mal2g1276 614 Gene3D - 17 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1276 Mal-Chr2 15329924 15333439 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1276 - - mtr:MTR_3g100120 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1276 2 15329924 15333439 Mal2g1276 2 15329924 15333439 ECH