Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1248 ATGCGTGTCACCGGGGATCTAGGGTTTTCGAGCCTGGTCCTTGTGGTGGTTTGTGTGGTGGTTCCGGTGATCGGATTTGTAATTCGCCGGAAATGGCAGATTGCGGTGGCTAGAAATGAAGAGATCAAGAGACTTTTGGTTTTGGCTGCTGAAGAAACTGCCAGGGTTGAGAGAGAGGCGTTGTATACCTCCGGCGTGGTGGTTTCCGCCACGAAAAATTATCAATGCGCTCTCTGCTATTTTCCCGCCACTGCACGCTGTGCTCAGTGCAAATCCGTTCGCTACTGTTCTGCTCATTGCCAAACCGTTCATTGGCATCAAGGTCATAAATTTGATTGTCGTCCTCCCAGCAAAACTCATCAGCGCGATGGTGTTATAAGTGATATTGGCAAGAGGGAAGTGGATCGAGACTACTCTGGTATCCATGAGGAGAAATCTGAAAGGGGAGGTGCAGAGTGTAAAATACCCTCTGAAGATACCAGCTTTTCTCATGAGGTTTCATTCGGAAAGGATGATGATATTAGAGCTGGGTTCCTTGCAGATGAAATTTTAGCAGATTCTAATTCTGAATTATCCAGTAACTCGTTTTCTGGATTTTCGGCTTCCACAAATTCGAGTGATTCATCTGATGATTCCTCTGTCTGTGAGAGTATCAGCTCAAATGAGCATGACATATCAGAGGGGCATGTGTCTGTTGTTCCCACCCTTGACATTACTGATAAAACCACAAGCAATAGCAAGGTGGATGCAGCAATGTCTTCTTCACCCAAGTTTGCTAGTTTGCTTGATTCAGTTGATGGTTCTTCTACAGTTCATAAATTAGATCATATCGCTCCCGGTTCCAGTAAAGAAGAGAGGAAGCTTGCATCAAATGGTGCCTCAGTCTCGAGCATATGGAAGGGGGCGAAACTTGAGCCTTCTGGATTCTGGGATAAAGCTCTTGATTCGAGAGGGATTAAAGACGACACTTGTCCATCCCATTCTGATGAATCCACGGGTGAAAAGACTGATTCTGGATTGTCATTTCGCTTTCAATTCAGTACCACGCCTCCTTTGCATGTACGAGATACTGAGGCTAAAGAATCTTCAAATGATGACGCCCTTCCAAACTCCGTTGGGAAGAATATGCCACATCCAGGATCAGCATCATCTGAGAATGACATTAATTCTTTAAAGGCAAGGAACCTCTCATTCATCAACGGCAAAGATGCCAATATTATGAGCAATACTCCCGGTGGTTCTGAATATGATCAATTGGAATCTAAAGACAGGTCTGAGCCGCCTTTATATTCCTTTTCCTCCCAATCCTCTAGTATTGGCAAAGATCCAGGTTCTGCAGATGCTATGAGCATCCATAACTTGCAACCATCTCGCTCTGTGGCATCAAATCATGTTGTGGACAACCATGGCTGCACCTTGAAGTCCACTGATATTAGATGCCAGACACGCGAACTTGCTGATTCTAAAGTAGCTTCTACTACTGAAGTAAATTCACATCCCAGTACAAAACATGGGAATAATGAATATGGGACTGTCACTTCTTCTCATGTTGCTAGCTATTCTGCAAACTCTAAGAGCGGCTTGAAAACATCCGTTTTAAAAGTCGTTGATCAGTTTAGAGGATCAAATTTGTCAAAGCACATTCCTTTAGCAGTTGGGAGTGATATTGCTGGAAAATACAATGACAAGGGTCTTTTTCCGTATGAATCATTTGTCAAGCTTTATAACTTCAACAAGGTGGACCTGCGCCCATTCGGTCTTATAAATGTTGGAAACAGTTGTTATGCTAATGCTGTACTTCAGTGCCTAGCTTTTACACCACCCTTAACTGCTTATTTGCTTCAAGGACTGCATTCTAAATCATGTGCAAATAAAAAGTGGTGTTTCACTTGTGAATTTGAAAGATTGATTTTGAAGTCAAAAGACACAAAATCTCCACTATCTCCAACGGCCATACTTTCTCAACTACAGAGTATTGGGAGTCAGCTCGGTAATGGCAAAGAAGAAGATGCTCATGAATTCCTAAGGCATGCTATTGACACAATGCAATCGGTATGTCTTACCGATGCTGGGATTAATGCATCAGGTTCATTGGAAGAGGACACTACTTTAATGGGGCAAACATTTGGAGGATACCTTCGATCAAAGATAAAATGCATGAAATGTGGTGGGAAGTCCGAGCGTCAGGAAAGGATAATGGATCTAACTGTTGAGATAGAAGGGGAGATATCAACACTTGCGGAGGCCCTTCGAAGATTTACAAGCACTGAGACTTTGGATGGAGAAAACAAGTACCACTGTGTCAGATGTAAATCTTATGAGAAGGCCAAGAAGAAGCTGACAGTTTCAGAGGCACCCAATATTCTTACAGTTGCATTAAAGAGATTTCAGTCTGGAAAATTCGGGAAGCTCAACAAGCCTATTCAATTTCCGGAAATACTTGACCTGGCGCCTTTCGTGAGTGGGACCAGTGATAAGACACCCATTTACAGATTGTACGGAGTGGTTGTTCATTTGGATGTTATGAATGCTTCTTTTTCGGGTCACTACGTGTGCTACTTGAAGAATATTCAAAATAAATGGTTCAAGGTTGACGACAGTGTGGTAACACCTGTTGAATTAGAGAGAGTCTTGACAAAAGGAGCATATATGCTTTTTTATGCAAGGTGCTCTCCAAGGGCCCCAAAATTGATTAGAAACAGGATACTATCCCCAGATTCAAAAAGTAAGGTCAATGGAAAGTCTATGAAAGCAAGATATACATCGTCAAATTCTGATGGGGCTGTACCCATCAGTAGTTCAGTTTCTCCTGACGGCTCAGCCACCTTGGAGTCTTTCTATTCAAGGTTTCACCACCTGAAAAGGATTTTAGAAGAAGACTCATCAAGTGATAGTTCTTCCCTTTTCGGCAGTAATTCCGATGAAGGTTCATGCAGTACTGATAGTACCCGTGATTCAACTAGCATGGATGACTTCTCCGATTATATTTTTGGTGATTCAGGGCGTGGATCGAGTAGCACGTGGAGGAATTCTGATTCTGACACGTCTTCGTCCTCCTCATCTCCCTTGAATTGTAGACAGTCGCCCCTATCTGATATGGACAAGTATGATTCAGTTTCTCCAGATGCAACTAGTTTGCGAATTCCCACCCGTTCAAGTGCGAAGACAGATAGGGGTGGTGATATTTCTCATTTGCATTCTGACACAATTTTACAGCATAGAAAGTTGGATAGGAGTAGCATTAGCAGCAATGGTAGTAGTAAGGACGCTGACTCATTTCTGAAACTAGGATCTAACCATTCTAAAGATAAGAACTCTGTTGTATCGTGTAGAAAATCAAGGAAAAGAACGGATTGA 3357 0.4269 MRVTGDLGFSSLVLVVVCVVVPVIGFVIRRKWQIAVARNEEIKRLLVLAAEETARVEREALYTSGVVVSATKNYQCALCYFPATARCAQCKSVRYCSAHCQTVHWHQGHKFDCRPPSKTHQRDGVISDIGKREVDRDYSGIHEEKSERGGAECKIPSEDTSFSHEVSFGKDDDIRAGFLADEILADSNSELSSNSFSGFSASTNSSDSSDDSSVCESISSNEHDISEGHVSVVPTLDITDKTTSNSKVDAAMSSSPKFASLLDSVDGSSTVHKLDHIAPGSSKEERKLASNGASVSSIWKGAKLEPSGFWDKALDSRGIKDDTCPSHSDESTGEKTDSGLSFRFQFSTTPPLHVRDTEAKESSNDDALPNSVGKNMPHPGSASSENDINSLKARNLSFINGKDANIMSNTPGGSEYDQLESKDRSEPPLYSFSSQSSSIGKDPGSADAMSIHNLQPSRSVASNHVVDNHGCTLKSTDIRCQTRELADSKVASTTEVNSHPSTKHGNNEYGTVTSSHVASYSANSKSGLKTSVLKVVDQFRGSNLSKHIPLAVGSDIAGKYNDKGLFPYESFVKLYNFNKVDLRPFGLINVGNSCYANAVLQCLAFTPPLTAYLLQGLHSKSCANKKWCFTCEFERLILKSKDTKSPLSPTAILSQLQSIGSQLGNGKEEDAHEFLRHAIDTMQSVCLTDAGINASGSLEEDTTLMGQTFGGYLRSKIKCMKCGGKSERQERIMDLTVEIEGEISTLAEALRRFTSTETLDGENKYHCVRCKSYEKAKKKLTVSEAPNILTVALKRFQSGKFGKLNKPIQFPEILDLAPFVSGTSDKTPIYRLYGVVVHLDVMNASFSGHYVCYLKNIQNKWFKVDDSVVTPVELERVLTKGAYMLFYARCSPRAPKLIRNRILSPDSKSKVNGKSMKARYTSSNSDGAVPISSSVSPDGSATLESFYSRFHHLKRILEEDSSSDSSSLFGSNSDEGSCSTDSTRDSTSMDDFSDYIFGDSGRGSSSTWRNSDSDTSSSSSSPLNCRQSPLSDMDKYDSVSPDATSLRIPTRSSAKTDRGGDISHLHSDTILQHRKLDRSSISSNGSSKDADSFLKLGSNHSKDKNSVVSCRKSRKRTD* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1248 1118 MobiDBLite consensus disorder prediction 402 450 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 190 226 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 402 416 - -
Mal2g1248 1118 SUPERFAMILY HIT/MYND zinc finger-like 71 116 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 489 510 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 1057 1075 - -
Mal2g1248 1118 ProSiteProfiles Zinc finger MYND-type profile. 76 113 IPR002893 -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 1076 1104 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 190 232 - -
Mal2g1248 1118 Gene3D Cysteine proteinases 578 900 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 315 387 - -
Mal2g1248 1118 Pfam Ubiquitin carboxyl-terminal hydrolase 585 887 IPR001394 GO:0004843|GO:0016579
Mal2g1248 1118 Pfam MYND finger 76 113 IPR002893 -
Mal2g1248 1118 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 1096 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 364 387 - -
Mal2g1248 1118 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 586 601 IPR018200 GO:0004843|GO:0006511
Mal2g1248 1118 Gene3D - 63 119 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 962 1118 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 962 990 - -
Mal2g1248 1118 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 585 890 IPR028889 -
Mal2g1248 1118 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 19 1096 - -
Mal2g1248 1118 ProSitePatterns Zinc finger MYND-type signature. 76 113 IPR002893 -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 337 352 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 315 336 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 427 443 - -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 908 938 - -
Mal2g1248 1118 SUPERFAMILY Cysteine proteinases 582 892 IPR038765 -
Mal2g1248 1118 MobiDBLite consensus disorder prediction 999 1034 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1248 Mal-Chr2 14922842 14929425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1248 565 934 Miscellaneous Gene Families AT4G31670 46.237 1.02e-116 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1248 K11855 - gmx:100793079 1411.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1248 2 14922842 14929425 Mal2g1248 2 14922842 14929425 ECH