Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1242 ATGAAATTCTCAGTAATTCAATACTGCAGCCACAGGCAACGTTACTGTGTACCTTCATCTTCTTCGCTACCATGGATATCACCTCTTAACTTTACAAAACCTGTAGAACGTAAACTAGATCCACCACCTGAAATCGTTGTCGATGAAACGAGGAAGAAGAGCAAATATATTACTCATGATGTTGCTATTAATTTGATTAAACGAGAGAAAGATCCGCAACACGCGTTGAAAGTATTTAATATGGTTTCTGAACAAAAGGGGTTTAATCACAACAATGCTACCTATGCGTCAATATTACAAAAGCTTGCTCAGTTTAAGAAGTTTCAAGCCGTTGATCGACTTTTGCATCAGATGACTTATGAAGCTTGTAAGTTTCATGAGGGTGTATTTATCAACCTCATGAAGCATTACTCGAAATGTGGTTTTCATGAGAAAGTGCTTGATACGTTTTTCTTGATTCAGACAATTGTTCGTGAAAAGCCCTCTCCGAAAGCTATTAGCTCTTGTCTCAATCTATTGGTTGATTCGAACCGGGTTGATTTGGCGCGGAAGTTGCTATTGTATGCCAAGAGGAGTCTAGTTTATAAGCCAAATGTTTGCATTTTCAATATCTTGGTGAAGTACCATTGCAAAAAGGGGGATCTTGAATCTGCTTTTGAAGTTGTTAAAGAAATGAGGAACTCCAAGTATTCATATCCTAACGTAATTACTTATTCAACCTTGATGGATGGTCTGTGTCGAAATGGAAGACTCAAAGAAGCTTTTGAACTTTTTGAGGAAATGGTCTCGAAGGATCGGATTGTGCCTGATCCGCTTACTTACAATGTTTTGATTAATGGATTTTGCCGTGAAGGGAAAGCTGATCGCGCCAGAAATGTGATTGAATTCATGAAAAATAATGGTTGCTGTCCTAATGTATTCAATTACTCAGCCCTAGTGGATGGATTATGTAAAGCGGGGAAACCACAAGAAGCAAAAGTGGTTTTGGCTGAGATGAAGAACTCTGGTTTGAAACCTGATACAGTTACCTACACTTCTTTGATCAATTTCTTCTCCAGGAATGGACAAATTGATGAGGCCATAGAGTTGCTTAAAGAAATGAAGGAAAATGAATGTCAGGCTGATACAGTTACATTCAATGTGATACTTGGAGGATTGTGCAGAGAAGGTAGATTGGAGGAGGCTCTGGATATGATTGAGAAACTCCCACACCAAGGTGTCTATTTGAACAAAGGTAGTTACAGGATTGTACTAAATTCCTTAACTCAAAAATGTGAGTTGTGGAAGGCAAAGAAATTATTAGGGCTAATGCTAAGTAGAGGGTTTGTACCCCATTATGCTACCTCAAATGAATTATTGGTTCGTCTTTGTAAGGAAGGGATGGCTGACGATGCTGCTGCGGCTCTATTTGACTTGGTGGATGTGGGGTTCCAGCCACAACTTGATTCTTGGGAACTTTTAATCGAATTAATCTGCAGAGACAGAAAGTTATTGTATGTTTTTGAGCTACTTGATGAATTAGTGACAGCAAATTCTTGA 1539 0.3873 MKFSVIQYCSHRQRYCVPSSSSLPWISPLNFTKPVERKLDPPPEIVVDETRKKSKYITHDVAINLIKREKDPQHALKVFNMVSEQKGFNHNNATYASILQKLAQFKKFQAVDRLLHQMTYEACKFHEGVFINLMKHYSKCGFHEKVLDTFFLIQTIVREKPSPKAISSCLNLLVDSNRVDLARKLLLYAKRSLVYKPNVCIFNILVKYHCKKGDLESAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDRIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKPQEAKVVLAEMKNSGLKPDTVTYTSLINFFSRNGQIDEAIELLKEMKENECQADTVTFNVILGGLCREGRLEEALDMIEKLPHQGVYLNKGSYRIVLNSLTQKCELWKAKKLLGLMLSRGFVPHYATSNELLVRLCKEGMADDAAAALFDLVDVGFQPQLDSWELLIELICRDRKLLYVFELLDELVTANS* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1242 512 TIGRFAM PPR: pentatricopeptide repeat domain 309 341 IPR002885 -
Mal2g1242 512 TIGRFAM PPR: pentatricopeptide repeat domain 342 375 IPR002885 -
Mal2g1242 512 TIGRFAM PPR: pentatricopeptide repeat domain 236 270 IPR002885 -
Mal2g1242 512 TIGRFAM PPR: pentatricopeptide repeat domain 377 410 IPR002885 -
Mal2g1242 512 TIGRFAM PPR: pentatricopeptide repeat domain 201 234 IPR002885 -
Mal2g1242 512 TIGRFAM PPR: pentatricopeptide repeat domain 273 306 IPR002885 -
Mal2g1242 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 305 339 IPR002885 -
Mal2g1242 512 Pfam PPR repeat 300 333 IPR002885 -
Mal2g1242 512 Pfam PPR repeat 196 226 IPR002885 -
Mal2g1242 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 270 304 IPR002885 -
Mal2g1242 512 Pfam PPR repeat family 339 388 IPR002885 -
Mal2g1242 512 Pfam PPR repeat family 233 283 IPR002885 -
Mal2g1242 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 340 374 IPR002885 -
Mal2g1242 512 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 19 510 - -
Mal2g1242 512 SUPERFAMILY TPR-like 162 365 IPR011990 GO:0005515
Mal2g1242 512 Gene3D Tetratricopeptide repeat domain 398 512 IPR011990 GO:0005515
Mal2g1242 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 234 268 IPR002885 -
Mal2g1242 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 375 409 IPR002885 -
Mal2g1242 512 Pfam PPR repeat 413 442 IPR002885 -
Mal2g1242 512 PANTHER FERTILITY RESTORER HOMOLOGUE A-LIKE 19 510 - -
Mal2g1242 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 410 444 IPR002885 -
Mal2g1242 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 198 232 IPR002885 -
Mal2g1242 512 Gene3D Tetratricopeptide repeat domain 39 156 IPR011990 GO:0005515
Mal2g1242 512 Gene3D Tetratricopeptide repeat domain 157 284 IPR011990 GO:0005515
Mal2g1242 512 Gene3D Tetratricopeptide repeat domain 285 392 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1242 146 511 Glycosyltransferase AT1G05670 27.660 4.26e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1242 - - mtr:MTR_3g100600 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1242 2 14836952 14838490 Mal2g1242 2 14836952 14838490 ECH