Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1200 ATGAAGTTTGCCTCCACAACGGTTCCCTGCTTCAGAAGCAAACCCAATCTGTCTCTGTTTCACTCTCTGTTCCATAATTCAAAATCTGCAATTGTTATCTTTCGCCAACTTTTACAAGCTAACGTAAACCCAAATGAATTTACTTTTTCATTACTCATCAAAGCTTGTCTTTCATCACCTTCTTTCATTCATGGTTCATCAACCGCGATATTACAAGCACGCCAGATTCAATCCCAATCTCTGAAACGTGGTATCAATCAATTTATTCATGTTAATACCTCTCTTATTGATTTATACATGAAACTTGGTTTTACCTATCATGCACGCCACATGTTTGATGAAATGTCTTACAGAGATGTTGTTTCTTGGAACGTATTGATTTGTGGTTATTCACAAAATGGGTATCTTTATCACGCTATTCAACTCTTTGTAGACATGTTAAGAGAGAGTTTTAGGCCTAATCAAACTACTATTGTTAGTTTGCTACCTTCTTGTGGTTGTTTTGAGCTGATTCTTCAAGGTAGATCCATTCATGGGTTTGGAATTAAAGCTGGGTTTGGTTTGGATTCTCATTTGAATAATGCCCTTATGTCAATGTATGCTAAATGTGATGATTTGGAAGCTTCTCAACTCTTGTTTGATGAAATGGATGAGAAGAGTGTTGTTTCATGGAATAGTATGATTGGTGCATATGGCCAAAATGGTCTTTTTGACAAGGCTATTCTTTGCTTTAAAGAGATGCTGAAGGAAGGTTTCCAACCGAGTTCGGTGACGATGATGAACCTTGTGTCGGCATCGGCAAATGTTCTTCCGGAAACTGTCCATTGTTTTGTCGTTAAATGTGGCTTTACCAGTGATGCTTCTGTTGTTACCTCGTTGGTTTGTCTATATGCAAAGCAAGGGTTGACGTATGTGGCGAAACAACTTTACAAATATTATCCCACAAAAGACTTGATTACGTTAACAGCAATAATCTCTAGCTATTCTGAAAATGGTGATATAGAGTCTGCGGTTGAGTGTTTTATCCAAACATTGCAGTTAGATATAAAACCAGATGCAGTTGCTTTGATCGGTGTAATTCATGGAATTAAAAGTCCTTCACATTTTGCTATTGGATGCACTTTCCATGGTTATGGGGTGAAGAGTGGGCTGTCTAATGATTGTTTAGTTGCAAATGGGCTAATAAGTTTGTATTCTAGATTTTATGAGATAGAAGCCGCTTTATCTTTGTTTTATGATGTGAGAGAAAAACCACTGATCACATGGAATTCTATGATATCTGGCTGTGTGCAGGCTGGAAAGTCTAGTGATGCCATGGAGTTGTTCTCCGAAATGAACATGTGTGGGCAAAAACCAGATGCCGTTACTATCGCCAGCTTACTATCTGGGTGTTGCCAGCTTGGTAACCTGCGTGTTGGAGAGACGCTGCATAGTTACATTCTGAGGAACAATGTGAGAGTGGAAGATTTTATAGGAACTGCTCTAATAGACATGTATAGCAAGTGCGGAAGACTAGATTATGCTGAAAAGATATTTTATAACATCAAGGATCCATGTTTGGCAACATGGAACTCCATCATATCAGGTTATAGTTTATATGGACTTGAGCAAAAAGCTTTCATTTGTTATTCAAAACTGCAAGAACAAGGGTTAGAACCGGATAAAATCACCTTCTTGGGAGTTTTAGCAGCATGCACACATCGGGGACTTGTCTATTTAGGATTGGAATACTTCACTATCATGACAGAAGAGTATGGTTTGATGCCAAGTCTGCATCATTATGCGTGCATAGTTGCTCTATTAGGTAGAGAAGGCTTGTTCAAAGAAGCAATTGAATTTATAAACAACATGGAGATTCGGCCCGATTCTGCTGTCTGGGGAGCTCTGCTTAGTGCTTGTTGCATTGAACAAGAGGTGAAGCTTGGGGAATGCTTGGCAAAAAAGTTGTTTCTATTGAATCACAAAAATGGTGGATTTTATGTATTAATGTCAAATCTTTATGCCATTGTCGGGAGATGGGATGATGTAGCAAGGGTGAGGGAAATGATGAAAGATAGTGGAGGAGATGGATGTTCAGGTGTTAGTGTAATTGATGTGATTTCTGTTAAAAACTCTAATAACAACTTAAGCCCAAGTGAAGTCTATTTGAATTCAAGCACTTGGCAGCATTTGTGTCTATATTGA 2184 0.3842 MKFASTTVPCFRSKPNLSLFHSLFHNSKSAIVIFRQLLQANVNPNEFTFSLLIKACLSSPSFIHGSSTAILQARQIQSQSLKRGINQFIHVNTSLIDLYMKLGFTYHARHMFDEMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRESFRPNQTTIVSLLPSCGCFELILQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNSMIGAYGQNGLFDKAILCFKEMLKEGFQPSSVTMMNLVSASANVLPETVHCFVVKCGFTSDASVVTSLVCLYAKQGLTYVAKQLYKYYPTKDLITLTAIISSYSENGDIESAVECFIQTLQLDIKPDAVALIGVIHGIKSPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFYEIEAALSLFYDVREKPLITWNSMISGCVQAGKSSDAMELFSEMNMCGQKPDAVTIASLLSGCCQLGNLRVGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKIFYNIKDPCLATWNSIISGYSLYGLEQKAFICYSKLQEQGLEPDKITFLGVLAACTHRGLVYLGLEYFTIMTEEYGLMPSLHHYACIVALLGREGLFKEAIEFINNMEIRPDSAVWGALLSACCIEQEVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMMKDSGGDGCSGVSVIDVISVKNSNNNLSPSEVYLNSSTWQHLCLY* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1200 727 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 119 153 IPR002885 -
Mal2g1200 727 PANTHER OS07G0578800 PROTEIN-RELATED 309 726 IPR045215 GO:0003723|GO:0009451
Mal2g1200 727 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 54 217 - -
Mal2g1200 727 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 309 726 - -
Mal2g1200 727 Pfam PPR repeat 320 342 IPR002885 -
Mal2g1200 727 Pfam PPR repeat 493 515 IPR002885 -
Mal2g1200 727 Pfam PPR repeat 522 551 IPR002885 -
Mal2g1200 727 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 317 351 IPR002885 -
Mal2g1200 727 Gene3D Tetratricopeptide repeat domain 493 723 IPR011990 GO:0005515
Mal2g1200 727 Gene3D Tetratricopeptide repeat domain 24 173 IPR011990 GO:0005515
Mal2g1200 727 Pfam PPR repeat family 219 264 IPR002885 -
Mal2g1200 727 Pfam PPR repeat family 420 466 IPR002885 -
Mal2g1200 727 Pfam PPR repeat family 118 164 IPR002885 -
Mal2g1200 727 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 220 254 IPR002885 -
Mal2g1200 727 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 418 452 IPR002885 -
Mal2g1200 727 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 211 310 - -
Mal2g1200 727 PANTHER OS07G0578800 PROTEIN-RELATED 211 310 IPR045215 GO:0003723|GO:0009451
Mal2g1200 727 PANTHER OS07G0578800 PROTEIN-RELATED 54 217 IPR045215 GO:0003723|GO:0009451
Mal2g1200 727 Pfam E motif 638 697 IPR046848 -
Mal2g1200 727 Gene3D Tetratricopeptide repeat domain 178 273 IPR011990 GO:0005515
Mal2g1200 727 Gene3D Tetratricopeptide repeat domain 274 366 IPR011990 GO:0005515
Mal2g1200 727 Gene3D Tetratricopeptide repeat domain 367 491 IPR011990 GO:0005515
Mal2g1200 727 TIGRFAM PPR: pentatricopeptide repeat domain 319 353 IPR002885 -
Mal2g1200 727 TIGRFAM PPR: pentatricopeptide repeat domain 522 554 IPR002885 -
Mal2g1200 727 TIGRFAM PPR: pentatricopeptide repeat domain 222 255 IPR002885 -
Mal2g1200 727 TIGRFAM PPR: pentatricopeptide repeat domain 420 454 IPR002885 -
Mal2g1200 727 TIGRFAM PPR: pentatricopeptide repeat domain 121 154 IPR002885 -
Mal2g1200 727 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 519 553 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1200 Mal-Chr2 14145449 14147632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1200 28 700 Glycoside Hydrolase AT3G49170 29.957 5.48e-101 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1200 - - gmx:100787089 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1200 2 14145449 14147632 Mal2g1200 2 14145449 14147632 ECH