Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1112 ATGAATAATCAACAAGCCCCAGTCAATGAGCAGCCTAGCACCCAAATCAATCGTAGTAAACAGGTACCATTTGGTTTGTTGCTCCCTATCTTGATTCCTCAACTTCCCAAAGATAGGGCCATGCAACTTCAAACTTTATTTAACAAATTGAAGAGAGATGAAATACCCAAAGAGCATTTTGTACGGCTTATGAAAGGGATTGTGGGGGATCAGATGCTTAGAATAGCATTAACAAAAGTGCAACAACAAGTACAGACAAACCCCAACGCAGGTTCTTCTGTGCAGCAGCACCCTGTGAGGATGCCAACTGTTACTTCCAGTGGAACAAAATTTAATGATCCCCATGGATTAGCACAACCGCATCAGAGAAGTATGATTGCTGCTGCAGACCATTCTCATAATGCTTCTTCAGCTATCCAAGTGAAGAGTGAGCCGACCTATTCAACTATGGACATTAGTGCTAAAAAATCTCAGGAACACGATGTTCCAGTAGTTCAACCAAATCAATTACCATCATCCAATTCTATTTCTGTAAGTCAAGAAACTGAAAGATCCTCGGTTCACATACAAGGCCTTAATAAGCAGCAACAACAACATATACATTTCCAATCGGCATATGGAGGCAGTGGTGGTAACTATAACCCTTTTCCCGGGACAACCACTGGTTCATCATCATCTTTCAGACCACAACCTCATCCTCATGATTCACACATAAGGCAAATTCCACATCAGAGCATTGGTCTAAATCACTTAGGTGTAGACCGTCAGAGTTCTTTCAATGATCCTAAGAGAATGCCAGGTGGATCTGTGTCAACAGTGGTAAACAATACAGCATCACACCAAACTTTGCAACCATCAGCAGAACAAAATCCGGGCTTGTTTTCATCTACTTCATATGTAAAAATGGAACCTAATGACCTTTCTATTGAGCAGCAACATAGGCATCATTTATCTAAATTACATTGGTTGCCTTCTGTTAATTCTGGTCAAAATGAACTGGGTAGTGGTGTAAATCAAGGCACTGTAAAGGATCCTATGATCCCCATTAGAGAAGAGGCGGAGGGAGAGTGCGAGCAGCAGGTTCCACCACCTGAGCAACAAGCTAAGCAGCAAAAGCCTGCAGCACCGGAGGCCATGGGACAGGTCATACTGCACCAGATATTGGATGTCTTCTGGGAGATTAGGACTGACTTCGGACGGCTAGAGAGGACATTCGCTATCAGACTTGGTGCAGTAGAGGCCAGACTGAAAGACCTCGAGGAAGCTGTCACACAGATTCCAAGGGATATCGGTTATGAGTCCACGGAGCAGAGAGTTAGAGCAGGCACTTCAATCAGTCAACCCTAA 1347 0.4365 MNNQQAPVNEQPSTQINRSKQVPFGLLLPILIPQLPKDRAMQLQTLFNKLKRDEIPKEHFVRLMKGIVGDQMLRIALTKVQQQVQTNPNAGSSVQQHPVRMPTVTSSGTKFNDPHGLAQPHQRSMIAAADHSHNASSAIQVKSEPTYSTMDISAKKSQEHDVPVVQPNQLPSSNSISVSQETERSSVHIQGLNKQQQQHIHFQSAYGGSGGNYNPFPGTTTGSSSSFRPQPHPHDSHIRQIPHQSIGLNHLGVDRQSSFNDPKRMPGGSVSTVVNNTASHQTLQPSAEQNPGLFSSTSYVKMEPNDLSIEQQHRHHLSKLHWLPSVNSGQNELGSGVNQGTVKDPMIPIREEAEGECEQQVPPPEQQAKQQKPAAPEAMGQVILHQILDVFWEIRTDFGRLERTFAIRLGAVEARLKDLEEAVTQIPRDIGYESTEQRVRAGTSISQP* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1112 448 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 148 312 IPR045144 GO:0005669|GO:0006352
Mal2g1112 448 MobiDBLite consensus disorder prediction 128 236 - -
Mal2g1112 448 MobiDBLite consensus disorder prediction 162 231 - -
Mal2g1112 448 MobiDBLite consensus disorder prediction 129 153 - -
Mal2g1112 448 PANTHER BNAA06G36870D PROTEIN 148 312 - -
Mal2g1112 448 Pfam RCD1-SRO-TAF4 (RST) plant domain 18 82 IPR022003 -
Mal2g1112 448 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 1 85 IPR045144 GO:0005669|GO:0006352
Mal2g1112 448 PANTHER BNAA06G36870D PROTEIN 1 85 - -
Mal2g1112 448 ProSiteProfiles RST domain profile. 15 86 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1112 Mal-Chr2 13120819 13122946 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1112 K03129 - mtr:MTR_3g102910 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1112 2 13120819 13122946 Mal2g1112 2 13120819 13122946 ECH