LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g1088	ATGTTGTCTAGGAAGGCTAGTGAAGACTCTCATGGCCAAGACTCTTCTTACTTTCTAGGATGGCAGGAGTACGAGAAAAATCCCTATCACCCAATTCATAATCCCACCGGAATCATTCAAATGGGACTTGCGGAGAATCAGCTTTCATTTGACCTTCTTGAATCATGGCTCCAAAAAAATTCTGATGTAGTGGAGATGAAGAAATTAGATGGGATATCCGTATTTAAAGAACTCGCTCTATTCCAGGATTATCATGGCTTACCTGCTTTCAAAAATAGACTGGCGGAGCTTATGGCAAAAATAAGAGGAAATGTTATAAAATTTGATTCGGAGAATCTTGTCCTCACAGCTGGTGCAACTTCTGCAAATGAGATTCTCATGTTTTGTCTAGCTGATCCTGGGGAAGCTTTTATTCTTCCCACACCCTATTATCCTGGGTTCGACAGAGATCTTAAATGGCGTACAGGGGTTAAGATTGTTCCAATGCATTGTTCTAGTTCAAACGGTTTCAGAATCACATCCTCTGCTTTAGAACAAGCCTATCAACAAGCACAAAACCAAAACATCAATGTCAAAGGGGTATTGATAACTAACCCTTCAAACCCATTAGGCATAACCATGACCAAAACAGAACTTGACAAACTAGTAGATTTTGCAATGGACAAAGACATTCATATAATAAGCGACGAAATCTATTCTGGTACAGTTTTCGACTCACCAAAATTTGTAAGCATCATGGAAGTTCTCAACGAAAGAATTCACGAAAATAATGAAATTTCTAAGCGTGTTCACATTGTTTATAGTCTTTCTAAAGACCTCGGCGTACCTGGTTTTCGTGTAGGAATGATATATTCAAATAACAAAATGGTTGTATCTGCTGCTACTAAAATGTCAAGTTTCGGACTTATTTCATCGCAAACTCAATATTTGCTCGCAAAATTACTCGGTGACGAGGAATTTACTATTAAATATATGGAAGAGAATAAGAAGAGGTTGAACAAACGAAAGGAAATGATTTTTAACGGTTTAAGAAACGCGGGGATTAAGTGTTTACAGAGCAATGCAGGGTTGTTCTGTTGGGTTGATATGAGACATTTGTTGAGTTCTTCAACTTTTGAGGCAGAGAATGAGCTTTGGAAAAAGATTCTTTACCAAATTGGTTTGAATATATCTCCTGGATCTTCTTGTCATTGTTCTGAACCAGGGTGGTTTAGGATTTGCTTTGCTAATATGTCTCAAGAAGCTTTGCAAGTTGCAATGCGAAGGATTAGGATCTTTACAGATTCAAATTCAACCATGTTTTCTATTAAACAACAATTTGTCACTAGTACTAAACCAATTATTATTACTACCATAGAAGGGAAATTACTAATTGGATTTTCTCGTTATCATTGA	1395	0.3706	MLSRKASEDSHGQDSSYFLGWQEYEKNPYHPIHNPTGIIQMGLAENQLSFDLLESWLQKNSDVVEMKKLDGISVFKELALFQDYHGLPAFKNRLAELMAKIRGNVIKFDSENLVLTAGATSANEILMFCLADPGEAFILPTPYYPGFDRDLKWRTGVKIVPMHCSSSNGFRITSSALEQAYQQAQNQNINVKGVLITNPSNPLGITMTKTELDKLVDFAMDKDIHIISDEIYSGTVFDSPKFVSIMEVLNERIHENNEISKRVHIVYSLSKDLGVPGFRVGMIYSNNKMVVSAATKMSSFGLISSQTQYLLAKLLGDEEFTIKYMEENKKRLNKRKEMIFNGLRNAGIKCLQSNAGLFCWVDMRHLLSSSTFEAENELWKKILYQIGLNISPGSSCHCSEPGWFRICFANMSQEALQVAMRRIRIFTDSNSTMFSIKQQFVTSTKPIIITTIEGKLLIGFSRYH*	465

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g1088	464	CDD	AAT_like	81	424	-	-
	Mal2g1088	464	Pfam	Aminotransferase class I and II	39	423	IPR004839	GO:0009058\|GO:0030170
	Mal2g1088	464	PANTHER	BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED	1	438	-	-
	Mal2g1088	464	SUPERFAMILY	PLP-dependent transferases	9	424	IPR015424	-
	Mal2g1088	464	Gene3D	-	61	317	IPR015421	GO:0003824
	Mal2g1088	464	PANTHER	1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11	1	438	-	-
	Mal2g1088	464	Gene3D	Aspartate Aminotransferase, domain 1	27	422	IPR015422	GO:0003824
	Mal2g1088	464	ProSitePatterns	Aminotransferases class-I pyridoxal-phosphate attachment site.	268	281	IPR004838	GO:0003824\|GO:0009058\|GO:0030170
	Mal2g1088	464	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	262	286	-	-
	Mal2g1088	464	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	41	67	-	-
	Mal2g1088	464	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	75	91	-	-
	Mal2g1088	464	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	134	155	-	-
	Mal2g1088	464	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	224	247	-	-
	Mal2g1088	464	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	294	317	-	-
	Mal2g1088	464	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	112	132	-	-
	Mal2g1088	464	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	188	212	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g1088	Mal-Chr2	12689814	12694572	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g1088	K01762		-	gmx:100803507	695.656

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal2g1088	2	12689814	12694572	Mal2g1088	2	12689814	12694572	ECH