Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1085 ATGATTCAAAGAAGTGTGAATTTTCCGAGTTTAAGGAAATTGCTTCTTCAACCTGGCTATCTGTCTTCTTCGTTTAAGATAGGGGCTTACAATGGCTATGCATCTCAGCCCTCCCCTCTTCCAATTCCAGACCCAACTTACAGTGATGATGAGTACGCTAATGTGGATTGGGACAGCCTTGGGTTTGGACTCATGCCAACCGATTTCATGTACGTTACAAAATGTTGTGCTGGCCAAAATTTTGGACATGGACAGCTTAATCGGTATGGGAACATTGAACTTAGCCCATCAGCAGGGGTCCTAAATTATGGCCAGGGATTATTTGAAGGAACCAAAGCATACAGAAAGGAAAATGGGCAGCTACTACTATTCCGTCCAGAAGAAAATGCAATTCGCATGAAGATTGGTGCTGAAAGAATGTGCATGACAGCACCTTCCATTGATCAATTTGTTGATGCATTGAAACAAACCGCTCTAGCAAATAAACGTTGGGTTCCTCCACCGGGAAAAGGATCTTTATACCTTAGGCCTCTACTCTTAGGAAGTGGTCCGGTTCTTGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATATGCTTCGCCTGTTCGCAACTATTTCAAGGAGGGTTCTGCGCCGCTCAACTTGTACGTCGAAGAAAATTTTGACCGTGCTTCTCGCCGCGGCACAGGAAGCGTTAAAACTATTTCCAATTATGCACCAGTCTTGATGGCACAAAATAGAGCCAAGAGCAGAGGATTTTCGGATGTGTTATACCTGGATTCAGATAGCAAGAAAAATTTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAAAAAATTTCAACACCTGCTATCAATGGAACCATACTTTCTGGAATCACCAGAAAAAGTGTCATTGAAATTGCCAGTGATTTGGGTTATCAGGTGGAAGAGCGTGTTGTTGCTGTCGATGAATTGACTGAGGCAGATGAAGTTTTCTGTACAGGAACTGCCGTTGGTGTTGCCCCTGTAGGGAGTATCACATACCAAAATAGAAGGGTGGACTATAAAACAGGCCCCGGAACCATTTGTCAAGAGCTGTGCAGTACCATTTTAGGAATACAAACGGGTAGTATTGAAGATAAGAAGGGATGGATCGTTGAATTTGATTAA 1164 0.4321 MIQRSVNFPSLRKLLLQPGYLSSSFKIGAYNGYASQPSPLPIPDPTYSDDEYANVDWDSLGFGLMPTDFMYVTKCCAGQNFGHGQLNRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGQLLLFRPEENAIRMKIGAERMCMTAPSIDQFVDALKQTALANKRWVPPPGKGSLYLRPLLLGSGPVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLYVEENFDRASRRGTGSVKTISNYAPVLMAQNRAKSRGFSDVLYLDSDSKKNLEEVSSCNIFIAKGKKISTPAINGTILSGITRKSVIEIASDLGYQVEERVVAVDELTEADEVFCTGTAVGVAPVGSITYQNRRVDYKTGPGTICQELCSTILGIQTGSIEDKKGWIVEFD* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1085 387 ProSitePatterns Aminotransferases class-IV signature. 270 299 IPR018300 GO:0003824
Mal2g1085 387 CDD BCAT_beta_family 93 374 IPR033939 GO:0004084|GO:0009081
Mal2g1085 387 PIRSF BCAT1 43 387 IPR005786 GO:0004084|GO:0009081
Mal2g1085 387 Gene3D - 215 386 IPR043132 -
Mal2g1085 387 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 83 385 IPR005786 GO:0004084|GO:0009081
Mal2g1085 387 Pfam Amino-transferase class IV 106 344 IPR001544 GO:0003824
Mal2g1085 387 Gene3D - 42 214 IPR043131 -
Mal2g1085 387 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 47 383 IPR036038 GO:0003824
Mal2g1085 387 PANTHER AMINO ACID AMINOTRANSFERASE 20 386 IPR005786 GO:0004084|GO:0009081
Mal2g1085 387 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 20 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1085 Mal-Chr2 12638629 12644018 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1085 K00826 - gmx:100782644 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1085 2 12638629 12644018 Mal2g1085 2 12638629 12644018 ECH