Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1071 ATGGCGGAAGAAGCACAGTACGCAACCCTAAAACGCAAATACGATGACCAACCCACCGCCACCGATATCCAACTCGAAGTCGCACACGCCAAACAAAAAGCACAAGAAGCCGCCGCTCGTCTCCTCAGCGTCACCGGCGCTCCACCACTCTCCTACGATCCAAAACGTACTAAGTCCGATAACGGTGCTCCACAATCCGGATTCGATTCTTACGATTTGAAACCGCAATACTCGCAACAAGGTAGTTATGGTTCTAGTAAGAAAATTGAAATACCTAATGGTAGGGTTGGTGTTCTTATTGGTAAAGGAGGTGAAACTATTAAGTATCTTCAGAGTCAATCTGGTGCTAAGATTCAAGTTACTCGTGATATGGATGCTGATCCTAATTCTTCTACGAGGATGGTTGAACTTATGGGTACTCCTGATGCTGTTTCTTCTGCTGAAAAACTTATCAATGAACTTCTTGCTGAGGCTGAAGCTGGAGCTTCTGGCGGTGGTACTAGACGGATGGTTGCACAATCTGGGGGTGATGAATTTGTGATGCAAATACCAAACAATAAGGTTGGCCTTATAATTGGTAAAGGAGGAGAAACAATAAAGAGTATGCAAGCTTCGACTGGAGCACGGATTCAGGTGATACCTTTGCATCCTCCCCCAGGTGATACATCAACAGAAAGAACATTAAAAATTGATGGGACCCCTGAACAAATTGAATCAGCAAAGCAATTGGTTAACCAGATCCTCACTGGGGAGAATCGTCTCAGAAATTCAGGGAACTCAGGTGGTTATACTCAGCAAGGTTACCAATCCCGACCACCATCTAGCTGGGCTCCCCCTGCAGCTCCTGTGCAACAACCTGGTTATGGCTATGGGCAACCTGGATCATACTCTGGTCCATCACCACCTCAGTATAACATGCCTCAGCCTCCATACCCAGGCTATCCTCCTCAACAACCTGTTGGATATTCCGCTAACTGGGACCAGTCTACTGCACCATCTCACCAGCAGTCTGCAAGTGGTTATGAATATTACAATCAACAACCCCAGCAACAGCAAAATCCTGGGGGTCCTGCACAGCCAGCTGATGGGTCTGCATACAGTTACAGTCAGCCACCTTCCTCTGGTTATAGCCAACCAGGACAGGGTTATGGTCAGGAAAGCTATGGTGCGTATAATGCGCAACAACAATCAGGGTATGGTCAGCCGCAAACATATGATCAGCAACAAGGTTATGGCTCTGCTCCCAGCTATGGCAGTGGGAGTAACCCAACACAAGAAGGGCACACTTCCAACTATGGGTCACAAGCAGATTCCTCCCAAACTTCCCAACCTTCTACTGTTGCCCAGCAAGGCTATGCTACCAACCAACAAGGAACTCCTCAACCAGGTTATGGGGTGGCCCCTACCTCCCAAGCAGCCTATGGAAATCAACCACAGTCTGCCTATGGACCTGGTTACGGTGCCCCTCCATCTCAAAAGCCAAGTGCAAATCCGCCTGTTTATGGTCAATCACAGTCACCTAGCACAGCAGGAGGCTATAGTCAGTCAGCATATCCCCCTACCCAGGCCCCACCATCTGGGTATGCTCAGCCAGAGTTAGGCACTCAGAGAGCACCAGTGCAACCAGGGTATGGTTCTCAATCATATGGTGCTCCTCAAGGTGGCCAGCCTGGCTATGGCCAGACTCCATCATATGGAAACAGTGCTTATGGTGCTGGTTATACTCAGGCTCCAGCATATGCTAGCGATGGAACAACTGCACAGGCTGTTCAACAGGGTGGTGTTGCTAAAGTGTCACCCAAGATTTGA 1809 0.487 MAEEAQYATLKRKYDDQPTATDIQLEVAHAKQKAQEAAARLLSVTGAPPLSYDPKRTKSDNGAPQSGFDSYDLKPQYSQQGSYGSSKKIEIPNGRVGVLIGKGGETIKYLQSQSGAKIQVTRDMDADPNSSTRMVELMGTPDAVSSAEKLINELLAEAEAGASGGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKSMQASTGARIQVIPLHPPPGDTSTERTLKIDGTPEQIESAKQLVNQILTGENRLRNSGNSGGYTQQGYQSRPPSSWAPPAAPVQQPGYGYGQPGSYSGPSPPQYNMPQPPYPGYPPQQPVGYSANWDQSTAPSHQQSASGYEYYNQQPQQQQNPGGPAQPADGSAYSYSQPPSSGYSQPGQGYGQESYGAYNAQQQSGYGQPQTYDQQQGYGSAPSYGSGSNPTQEGHTSNYGSQADSSQTSQPSTVAQQGYATNQQGTPQPGYGVAPTSQAAYGNQPQSAYGPGYGAPPSQKPSANPPVYGQSQSPSTAGGYSQSAYPPTQAPPSGYAQPELGTQRAPVQPGYGSQSYGAPQGGQPGYGQTPSYGNSAYGAGYTQAPAYASDGTTAQAVQQGGVAKVSPKI* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1071 602 MobiDBLite consensus disorder prediction 40 88 - -
Mal2g1071 602 CDD KH-I 178 244 - -
Mal2g1071 602 ProSiteProfiles Type-1 KH domain profile. 84 151 - -
Mal2g1071 602 Pfam KH domain 87 153 IPR004088 GO:0003723
Mal2g1071 602 Pfam KH domain 180 245 IPR004088 GO:0003723
Mal2g1071 602 Coils Coil 20 40 - -
Mal2g1071 602 MobiDBLite consensus disorder prediction 300 317 - -
Mal2g1071 602 MobiDBLite consensus disorder prediction 497 523 - -
Mal2g1071 602 SMART kh_6 175 249 IPR004087 GO:0003676
Mal2g1071 602 SMART kh_6 83 156 IPR004087 GO:0003676
Mal2g1071 602 CDD KH-I 86 151 - -
Mal2g1071 602 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 43 587 - -
Mal2g1071 602 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 179 294 IPR036612 GO:0003723
Mal2g1071 602 MobiDBLite consensus disorder prediction 540 571 - -
Mal2g1071 602 MobiDBLite consensus disorder prediction 58 87 - -
Mal2g1071 602 Gene3D K Homology domain, type 1 77 173 IPR036612 GO:0003723
Mal2g1071 602 Gene3D K Homology domain, type 1 174 272 IPR036612 GO:0003723
Mal2g1071 602 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 43 587 - -
Mal2g1071 602 MobiDBLite consensus disorder prediction 252 273 - -
Mal2g1071 602 MobiDBLite consensus disorder prediction 321 478 - -
Mal2g1071 602 MobiDBLite consensus disorder prediction 252 578 - -
Mal2g1071 602 ProSiteProfiles Type-1 KH domain profile. 176 244 - -
Mal2g1071 602 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 86 160 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1071 Mal-Chr2 12482793 12486658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1071 K13210 - gmx:100813135 589.726