Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1060 ATGCAGGTTCAAAGGCATCAATCTGAATTTGGAAGAGTCAAAGGTTTATTCACTAGAAACTATTTATCTCCTAATAACTTTCAAGGCTATACAACAAGGAATAGGATTTTCTTCTCCCAGTCTAGATATCTAGGAAATCTGACCCGACCATTACGTGATTCATCTGAAGCAGAGGAAGCCTCTTCTCTTAAAGAACTTTACAATGAAATTGATCCTGAAGCCGTGATTAGGGCATATGAAAGCAAGCCATCTCTGCATACAAATGCTTTCGCATTTTCTGAATATGTTAAAGCATTAGTAAAAGTTGGTAGGCTGGATGAAAGTGAATTTCTAAACACTTTGCTAAGAGCTATTTCTAATTCGGCGAGAAAGGAAGAAAGTAGTATATGTGGCATTGCTGCTCTTAGAAATGTCAGAGAACTTACAAAAGATGGGATTCTTGGAACTACAAGTGCTCCTATTGATATGGTCGCTGCATTAGAAGGTGGAGATTTCAAAGAGCAGCTATGGAATACAATTTGGTTTGTTGCAGTGGCCTTCCTCTTGATTTGTGGTGTAGGAGCTCACATCGTGCATAAAAGAATTAGTAAAGAAGTGCAGCCCAGTGTAGAGACAAGTACTAAATTTAGCGATGTGAAAGGTGTAGACGAGGCAAAGGCTGAACTTGAAGAAATTGTTGATTACCTAAGAGATCCTAAGCGCTTTACTCGTCTTGGTGGCAAACTCCCAAAAGGTGTTTTGCTTGTTGGCCCGCCTGGCACAGGTAAAACAATGTTGGCGAGAGCTATTGCTGGAGAGGCTGGGGTTCCTTTCTTCTCAAGCAGTGGACGTGAATTTGAAGAGATGATTGTTGGTGATGGTGCGCGAAGGGTGAGAGATCTTTTTGCTGCTGCAAAAAAGAGGTCGCCTTGTATAATCTTTATTGATGAGATTGATGCTATTGGTGGAAAACGAAATCCAAATGACCAAATGTACACGAAGTTGACTTTAAATCAAATGCTTGTTGAGTTAGATGGATTTAACCAAAATGAAGGCATAATTGTGATTGGTGCTACTAACTTTCCCGAGTCACTAGATAAGGCTTTGGTGAGACATGGCCGATTTGATCGCCTTGTTGCAGTTCGCAATCCAGATGTAAAAGGACGGCGGCATATTTTGGAATCTCACATGTCAAAGGTTCTGAAGGCAGACGATGTTGATCTGATGATTATTGCTCGGTGTACACCTGGGTTCTCTGGTGCTGACCTTGCAAACTTGGTTAATGTTGCTGCCCTGAGGGCTGCAAAGGGTGGTGCAAAAGCCGTAAGCACGCATGATTTAGAGTTTGCACGGGAAAAGATATTAATGGGAAGTCAGCGCAAATCAGTTGTTATATCTGAGGAGTCAAGAAAGATGACTGCTTTCCATGAGGGTGGCCATGCCTTAGTTGCAATTCATACTGATGGTGCGCGTCCTGTTCACAAGGCAACTATTGTTCCTCGTGGGATAGCTCTTGGCATGGTTTCTCAACTGCCTGACAAGGATCAGACAAGTCTCTCCCGTAAACAGATGCTTGCTAGGCTTGATGTTTGCATGGGAGGTCGGGTTGCTGAAGAGATCATTTTCGGACATAGTGGAGTTACTTCTGGTGCATCCTCAGATCTTTCTAAGGCAACTGCTCTAGCCAGGCAAATGGTTACTAAATATGGTATGAGTGCTGAAGTTGGACCCGTCAGTCACAATTACTTCGATAATGGGAGAAGTATGAGCTCAGAAACTAGGCTGCTTATTGAGAAAGAAGTGAAGAATTTGCTTGAGAGAGCTTACAACAATGCAAAAACTATTCTAACCACCCATGAAAAGGAGCTTCATGCGCTTGCAAATGCTCTTCTGGAGCATGAGACACTTACAGGAAGTCAGATAAAGGATTTACTTGCAAAGGTCAAATCCCAGCAGAAACAGCGGCAGTCACGTGTAGTCAAAGCTCAAGGAAGTTCACGGTCCAATCCAGCAGTTGCGGAGTCCACCGATGCATCTGCAGCTGAACCTTCTGCTGCTGCAAAGGCTCAAGGAGTTGCCGCAGTAGCAGGGGCCGGGGTACACAGCAACCAGCAAGAGCTCCAGCCCCTCGAGACTTCTTAA 2121 0.4371 MQVQRHQSEFGRVKGLFTRNYLSPNNFQGYTTRNRIFFSQSRYLGNLTRPLRDSSEAEEASSLKELYNEIDPEAVIRAYESKPSLHTNAFAFSEYVKALVKVGRLDESEFLNTLLRAISNSARKEESSICGIAALRNVRELTKDGILGTTSAPIDMVAALEGGDFKEQLWNTIWFVAVAFLLICGVGAHIVHKRISKEVQPSVETSTKFSDVKGVDEAKAELEEIVDYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSSSGREFEEMIVGDGARRVRDLFAAAKKRSPCIIFIDEIDAIGGKRNPNDQMYTKLTLNQMLVELDGFNQNEGIIVIGATNFPESLDKALVRHGRFDRLVAVRNPDVKGRRHILESHMSKVLKADDVDLMIIARCTPGFSGADLANLVNVAALRAAKGGAKAVSTHDLEFAREKILMGSQRKSVVISEESRKMTAFHEGGHALVAIHTDGARPVHKATIVPRGIALGMVSQLPDKDQTSLSRKQMLARLDVCMGGRVAEEIIFGHSGVTSGASSDLSKATALARQMVTKYGMSAEVGPVSHNYFDNGRSMSSETRLLIEKEVKNLLERAYNNAKTILTTHEKELHALANALLEHETLTGSQIKDLLAKVKSQQKQRQSRVVKAQGSSRSNPAVAESTDASAAEPSAAAKAQGVAAVAGAGVHSNQQELQPLETS* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1060 706 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 198 638 IPR005936 GO:0004176|GO:0004222|GO:0016020
Mal2g1060 706 SUPERFAMILY FtsH protease domain-like 457 643 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mal2g1060 706 SMART AAA_5 242 378 IPR003593 -
Mal2g1060 706 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 35 648 IPR005936 GO:0004176|GO:0004222|GO:0016020
Mal2g1060 706 Pfam Peptidase family M41 457 637 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mal2g1060 706 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 4, MITOCHONDRIAL-LIKE 4 674 - -
Mal2g1060 706 Gene3D - 378 449 - -
Mal2g1060 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 468 IPR027417 -
Mal2g1060 706 MobiDBLite consensus disorder prediction 645 678 - -
Mal2g1060 706 CDD AAA 213 372 - -
Mal2g1060 706 Pfam AAA+ lid domain 398 441 IPR041569 -
Mal2g1060 706 Pfam ATPase family associated with various cellular activities (AAA) 246 374 IPR003959 GO:0005524|GO:0016887
Mal2g1060 706 ProSitePatterns AAA-protein family signature. 346 364 IPR003960 GO:0005524|GO:0016887
Mal2g1060 706 Gene3D Peptidase M41 450 650 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mal2g1060 706 Coils Coil 595 615 - -
Mal2g1060 706 MobiDBLite consensus disorder prediction 645 668 - -
Mal2g1060 706 PANTHER METALLOPROTEASE M41 FTSH 4 674 - -
Mal2g1060 706 Gene3D - 187 374 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1060 Mal-Chr2 12335969 12340491 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1060 63 638 Miscellaneous Gene Families AT5G53170 50.412 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1060 K08955 - qsu:112016381 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1060 2 12335969 12340491 Mal2g1060 2 12335969 12340491 ECH