Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1053 ATGGATTCTTCTCAAGATTCTACTTTGGCTGGTTTGGTGAAAAATGCTTCTATTAAGAGGGAAGAATCTAGTTTCGATGGGGTTCCTGTTTATGTTAAGGAGTTAATTGCTGGTGGATTTGCTGGTGCGCTTGCTAAGACTTCTGTTGCACCTCTCGAACGGGTTAAGATACTCTGGCAGACAAGAACTGGAGGATTCCATACTCTTGGTGTGTACCAATCTGTGAATAAGTTGCTAAAGCATGAAGGTTTTCAAGGATTATATAAAGGAAATGGAGCTAGTGTTATCCGGATTGTTCCATATGCAGCCTTGCATTTTATGACATATGAGCGGTATAAAAGTTGGATTCTAAATAATTATCCCATGTTAGGAACGGGTCCTTCTATTGATCTTTTAGCTGGCTCAGCAGCAGGGGGGACTTCAGTTTTATGTACATACCCCTTAGATCTTGCCCGTACCAAACTTGCTTATCAGGTGGTGGACACTAAAGGATGTATCAAAGATGGTATTAAAGGAGTTCATTCTCAACCTGTAGGTCCTGTTCATAATGGCATTAAAGGTGTACTTACAAGTGCCTATAAGGAAGCTGGTGTTCGTGGGCTTTATAGAGGTGTAGGTCCAACCCTTACTGGAATTCTTCCATATGCGGGTTTAAAGTTCTATACGTATGAGAAGTTGAAGATGCATGTTCCTGAAGAACATCAGAAATCCATTCTGATGCGCCTTTCTTGTGGAGCTCTTGCTGGATTGTTTGGGCAGACTTTAACATACCCTTTGGATGTTGTTAAGAGACAAATGCAGGTTGGGAGCCTGCATAATGGAGCTGATGGAGATGCCGGATACAAAAATACATTGGATGGACTTCGGAAGATTGTTCGAAATCAAGGGTGGAGGCAGTTGTTTGCAGGCGTAAGCATTAACTACATAAGGATCGTTCCATCAGCTGCAATTAGTTTCACCACATATGACATGATGAAGGCTTGGCTTGGCGTACCACCCCAACAAAAGTCTCAATCAGTTTCCACAGGATAA 1032 0.4215 MDSSQDSTLAGLVKNASIKREESSFDGVPVYVKELIAGGFAGALAKTSVAPLERVKILWQTRTGGFHTLGVYQSVNKLLKHEGFQGLYKGNGASVIRIVPYAALHFMTYERYKSWILNNYPMLGTGPSIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTKGCIKDGIKGVHSQPVGPVHNGIKGVLTSAYKEAGVRGLYRGVGPTLTGILPYAGLKFYTYEKLKMHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLHNGADGDAGYKNTLDGLRKIVRNQGWRQLFAGVSINYIRIVPSAAISFTTYDMMKAWLGVPPQQKSQSVSTG* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1053 343 Gene3D Mitochondrial carrier domain 29 330 IPR023395 -
Mal2g1053 343 Pfam Mitochondrial carrier protein 31 119 IPR018108 -
Mal2g1053 343 Pfam Mitochondrial carrier protein 129 230 IPR018108 -
Mal2g1053 343 Pfam Mitochondrial carrier protein 236 329 IPR018108 -
Mal2g1053 343 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 17 337 - -
Mal2g1053 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 115 IPR018108 -
Mal2g1053 343 SUPERFAMILY Mitochondrial carrier 32 324 IPR023395 -
Mal2g1053 343 PANTHER SOLUTE CARRIER FAMILY 25 17 337 - -
Mal2g1053 343 PRINTS Mitochondrial carrier protein signature 245 267 IPR002067 GO:0055085
Mal2g1053 343 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Mal2g1053 343 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Mal2g1053 343 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Mal2g1053 343 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Mal2g1053 343 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085
Mal2g1053 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 236 328 IPR018108 -
Mal2g1053 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 229 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1053 Mal-Chr2 12279498 12284188 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1053 26 311 Organic Solute Cotransporters AT4G26180 55.594 9.53e-114 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1053 - - gmx:100784421 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1053 2 12279498 12284188 Mal2g1053 2 12279498 12284188 ECH