Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1048 ATGGCGGATCCCTATTACCCATACCCAACTCCCACAGCTTCTGACGGAGCAAGCTTTGGCAGAAGTAGTTATGCTGGTTACATTCCGTCTGAGGCACCATCATTGTCTTCTCCTCACCATAAATCCACTGAATTTCCAGGTTACGGATCAGATTACCTGCATAAAGATGTAAGCTTGTTCCGGATGGAGCCGTATGGTGTTGATGATACCAGGGGATCTAGAGTTCAATCCGAACATAACGCGACAAGTTATAATCCTCTTGAAGATGTAGATTTAAGTACTAAAAGAGATACTCTGTTGGGCGTTAATCCAGGTGTTCCTGATGCAATTGCAAACAATGAAAGATCAATCTCTAAAAGCAATTATGATGCCCTCCCAGTTTCAGCTGCGGAATCAAACATTTTGTTTGTGGGCGGGCTTCCAAAAGACTGCACTAGAAGGGAAGTAGATCTTTTCCGTCCCTTTATCGGCTATAAGGATATCAAAGTTGTTCACAAGGAGCCAAGACGAAGTGGAGACAAGGCTATGATTTTTTGTTTTGTGGAGTTTACTGAACCCAAATGTGCTCTCACCGCCATGGAAGCTCTGCAAGGCTACAAGTTTGATGATAAAAAGCCCGATTCACCAACCTTAAAAATCAAGTTTGCGCACTTTCCTTTCCGCCCACCAACTGATGATGGACAATAA 687 0.4352 MADPYYPYPTPTASDGASFGRSSYAGYIPSEAPSLSSPHHKSTEFPGYGSDYLHKDVSLFRMEPYGVDDTRGSRVQSEHNATSYNPLEDVDLSTKRDTLLGVNPGVPDAIANNERSISKSNYDALPVSAAESNILFVGGLPKDCTRREVDLFRPFIGYKDIKVVHKEPRRSGDKAMIFCFVEFTEPKCALTAMEALQGYKFDDKKPDSPTLKIKFAHFPFRPPTDDGQ* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1048 228 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 133 218 IPR000504 GO:0003723
Mal2g1048 228 SUPERFAMILY RNA-binding domain, RBD 83 205 IPR035979 GO:0003676
Mal2g1048 228 Gene3D - 127 218 IPR012677 -
Mal2g1048 228 SMART rrm1_1 134 214 IPR000504 GO:0003723
Mal2g1048 228 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 9 221 - -
Mal2g1048 228 PANTHER PROTEIN COUCH POTATO 9 221 - -
Mal2g1048 228 MobiDBLite consensus disorder prediction 1 23 - -
Mal2g1048 228 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 135 205 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1048 Mal-Chr2 12213489 12216687 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1048 - - lang:109343815 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1048 2 12213489 12216687 Mal2g1048 2 12213489 12216687 ECH