Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1040 ATGCGAATGAAAAGTATGAGGAAGAAGAAGAAGGGTGGTCCCGCCGGTGGCGAAGATAATGAAGCAAAAACGGCGAAGATGTTGAAGGGAGCAGAGAGGTCAGCGTATTTCGCAAGAAGAGAAGCAGCGAAAGTATTGAAAACTGTTCTCGAAGGAGACGCTAAGCGCCGTGCACTTGCTTCTATCAAAACCCTCGTTTATCATCCTTCTGTTAGAAACAAGAAAGCCACTTTTGCTCTTATCTGTCAAACCCTTAAACATCTTCCTGTTATCAATGATGTCTTGGAAGCTGCTAAAATTCTCAATACCAAGTGGAAGAGGCAACAAGAATTGATTTATATCATTGTCTATGATATCCTTTTCGGCCAGGAAGTTCCACTAGTTGGTGATGCAGAGAAGTACCTCATGCGCCACAAGGAAGCCCTACATTTACATCTGAAAAAGATTTTGTCACAGAAAAATGTGACGACCGTTAAAGAGTTGTTTGCTCTACACGAGGTTCCTGATGTTTCTGTACCTCGAATTGTTCGTGTGAATACACTTAAAATGGATGTTGATTCTGCCATAGTTGAACTTCAGAAAAAATACTCGGTTCAAAAGGATGATTTACTGCATGACTTGCTGATACTCCCTCCAGGAACTGATTTACATGATCATCCTCTTGTCAAAAACGGAAGCATATTTCTGCAAGGTAAGGCGAGTTCAATGGTGGCACCGGCCCTTAGCCCTGAACCAGGATGGGAGGTTCTTGATGCATGCGCTGCACCCGGAAACAAAACTGTCCACCTTGCTGCCCTTATGAAGAAAAAGGGTAGGATTATAGCATGTGAGCTGAAAAAGGAAAGGATTAAGCGTTTGAATGACACTATAAAGCTATCTGGGGCTACCAACATACAGGTTCTCAATGAGGATTTCTTGAACATAAATCCCAAAGACCCTTCATATTCTAAGGTAAAAGCTATTCTTTTGGATCCTTCCTGCTCTGGTTCTGGTACTGCCGCTTCTAGACTAGACCATTTGCTCCCATCTAAAGCAGCAGGTCAGGATGTTGATATGGAAAGATTGAACAAGCTTGCAGCTTTTCAGAGAAAAGCTCTTCAGCATGCCTTCCTTTTTCCAGCTTTGGAACGAGTTGTGTACAGTACATGTTCAATAAACCAAATTGAGAATGAAGATGTTGTGAAATCTGTTTTGCCCATAGCCGAGTCATATGGATTTCAACTTGTAAAGCCCTTCCCCGGGTGGCCGTGTCGAGGTCTTCCGGTATTTGAAGGCTCTGAACACCTGGTTCGGACAGATCCTGCCAAGCACGGCGAGGGTTTCTTCATTGCATTGTTTGCCAAGAAAGATGATGTTAACATGTCGGAGAGGTCAAATAAAAATGACAATAGGACGCTCCACAGTTGTACCAGAACTAGAAACGTGCGAAGGAAGCAACCAATTCACACTAATATGTTCAGAATGTGGTTATCTGGTCAACTGTACCAGGGTCGCATACTAGACAATTTCTACGGTGGTCGGAATTTGAGGGATGAAAGAGCTGTCTAA 1548 0.4322 MRMKSMRKKKKGGPAGGEDNEAKTAKMLKGAERSAYFARREAAKVLKTVLEGDAKRRALASIKTLVYHPSVRNKKATFALICQTLKHLPVINDVLEAAKILNTKWKRQQELIYIIVYDILFGQEVPLVGDAEKYLMRHKEALHLHLKKILSQKNVTTVKELFALHEVPDVSVPRIVRVNTLKMDVDSAIVELQKKYSVQKDDLLHDLLILPPGTDLHDHPLVKNGSIFLQGKASSMVAPALSPEPGWEVLDACAAPGNKTVHLAALMKKKGRIIACELKKERIKRLNDTIKLSGATNIQVLNEDFLNINPKDPSYSKVKAILLDPSCSGSGTAASRLDHLLPSKAAGQDVDMERLNKLAAFQRKALQHAFLFPALERVVYSTCSINQIENEDVVKSVLPIAESYGFQLVKPFPGWPCRGLPVFEGSEHLVRTDPAKHGEGFFIALFAKKDDVNMSERSNKNDNRTLHSCTRTRNVRRKQPIHTNMFRMWLSGQLYQGRILDNFYGGRNLRDERAV* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1040 515 CDD AdoMet_MTases 249 337 - -
Mal2g1040 515 Gene3D Sun protein; domain 3 165 229 - -
Mal2g1040 515 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 173 449 IPR029063 -
Mal2g1040 515 Pfam 16S rRNA methyltransferase RsmB/F 240 446 IPR001678 GO:0008168
Mal2g1040 515 PRINTS RNA (C5-cytosine) methyltransferase signature 319 331 IPR023267 GO:0001510
Mal2g1040 515 PRINTS RNA (C5-cytosine) methyltransferase signature 375 391 IPR023267 GO:0001510
Mal2g1040 515 PRINTS RNA (C5-cytosine) methyltransferase signature 431 448 IPR023267 GO:0001510
Mal2g1040 515 PRINTS RNA (C5-cytosine) methyltransferase signature 250 260 IPR023267 GO:0001510
Mal2g1040 515 PRINTS RNA (C5-cytosine) methyltransferase signature 221 235 IPR023267 GO:0001510
Mal2g1040 515 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 29 478 IPR023267 GO:0001510
Mal2g1040 515 MobiDBLite consensus disorder prediction 1 23 - -
Mal2g1040 515 Gene3D Vaccinia Virus protein VP39 230 455 IPR029063 -
Mal2g1040 515 PANTHER BNAA09G04380D PROTEIN 29 478 - -
Mal2g1040 515 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 164 449 IPR001678 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1040 Mal-Chr2 12149068 12155165 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1040 K15264 - gmx:100775620 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1040 2 12149068 12155165 Mal2g1040 2 12149068 12155165 ECH